Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N07
(969 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 99 4e-21
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 99 4e-21
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 99 4e-21
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 99 4e-21
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 62 4e-10
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 44 2e-04
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 33 0.40
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 31 0.93
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 29 3.8
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 29 3.8
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 29 3.8
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 29 6.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 99.1 bits (236), Expect = 4e-21
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF KEA EMGKGS KYAWVLD LKAERERGITID ALWKF +KYY T IDAP H D I
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 53.2 bits (122), Expect = 3e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVL+V G GE EAGIS GQ R
Sbjct: 101 NMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 99.1 bits (236), Expect = 4e-21
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF KEA EMGKGS KYAWVLD LKAERERGITID ALWKF +KYY T IDAP H D I
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 422 NMITGTSXADCAVLIV 469
NMITGTS ADCAVL+V
Sbjct: 101 NMITGTSQADCAVLVV 116
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 99.1 bits (236), Expect = 4e-21
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF KEA EMGKGS KYAWVLD LKAERERGITID ALWKF +KYY T IDAP H D I
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 53.2 bits (122), Expect = 3e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVL+V G GE EAGIS GQ R
Sbjct: 101 NMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 99.1 bits (236), Expect = 4e-21
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF KEA EMGKGS KYAWVLD LKAERERGITID ALWKF +KYY T IDAP H D I
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 53.2 bits (122), Expect = 3e-07
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVL+V G GE EAGIS GQ R
Sbjct: 101 NMITGTSQADCAVLVVACGTGEFEAGISKNGQTR 134
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 46.0 bits (104), Expect = 4e-05
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAER 321
KF KEA EMGKGS KYAWVLD LK +
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/59 (47%), Positives = 32/59 (54%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF EA GK S YAWVLD + ERERG+T+D F S +DAP H D I
Sbjct: 204 KFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 262
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 419 SNMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
SNMITGTS AD A+L+V GE E G GQ +
Sbjct: 263 SNMITGTSQADAAILVVNATTGEFETGFENGGQTK 297
Score = 33.1 bits (72), Expect = 0.31
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 143 NIVVIGHVDSGXSTTTGHXIY 205
N++V+GHVD+G ST GH ++
Sbjct: 172 NLIVVGHVDAGKSTLMGHLLH 192
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/59 (47%), Positives = 32/59 (54%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF EA GK S YAWVLD + ERERG+T+D F S +DAP H D I
Sbjct: 222 KFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 280
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 419 SNMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
SNMITGTS AD A+L+V GE E G GQ +
Sbjct: 281 SNMITGTSQADAAILVVNATTGEFETGFENGGQTK 315
Score = 33.1 bits (72), Expect = 0.31
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 143 NIVVIGHVDSGXSTTTGHXIY 205
N++V+GHVD+G ST GH ++
Sbjct: 190 NLIVVGHVDAGKSTLMGHLLH 210
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
K+ +EA E G+ S +W +D ERE+G T++ F K + T +DAP H +
Sbjct: 143 KYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFV 201
Score = 36.3 bits (80), Expect = 0.033
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMI G + AD AVL+++ GE E G GQ R
Sbjct: 203 NMIVGANQADLAVLVISARRGEFETGFDRGGQTR 236
Score = 34.7 bits (76), Expect = 0.10
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 122 GXXKTHXNIVVIGHVDSGXSTTTGHXIYKCG 214
G K H N+V +GHVD+G ST G ++ G
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTG 134
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 295 VLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXD 411
+LD L+ ERERGIT+ Y ID P H D
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVD 114
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 295 VLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXD 411
V D L ERERGIT+ A + ID P H D
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVD 102
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 143 NIVVIGHVDSGXSTTTGHXIYKCGGXRQTYH 235
NI VI HVD+G +T T +Y G H
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHVAGH 57
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 298 LDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
+D E+ RGITI+ ++ +K + ID P H D I
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 126
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 298 LDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
+D E+ RGITI+ ++ +K + ID P H D I
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 127
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 298 LDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
+D E+ RGITI+ ++ +K + ID P H D I
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYI 127
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +1
Query: 259 HEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXD 411
HE+ +G +D + ER+RGITI A ID P H D
Sbjct: 75 HEV-RGKDDVGATMDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVD 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,237,942
Number of Sequences: 27780
Number of extensions: 155240
Number of successful extensions: 274
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2510937120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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