Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N07
(969 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 100 2e-23
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 99 5e-23
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 72 7e-15
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 54 2e-09
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 24 2.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 100 bits (239), Expect = 2e-23
Identities = 47/59 (79%), Positives = 47/59 (79%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF KEA EMGKGS KYAWVLD LKAERERGITID ALWKF SKYY T IDAP H D I
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 99
Score = 62.1 bits (144), Expect = 7e-12
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 54.0 bits (124), Expect = 2e-09
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVLIV G GE EAGIS GQ R
Sbjct: 101 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 134
Score = 26.6 bits (56), Expect = 0.34
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 553 GVXQLIVGVXQXDST*LHPYXXPRF 627
GV QLIVGV + DST PY RF
Sbjct: 144 GVKQLIVGVNKMDST-EPPYSETRF 167
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 99.1 bits (236), Expect = 5e-23
Identities = 46/59 (77%), Positives = 47/59 (79%)
Frame = +1
Query: 241 KFXKEAHEMGKGSXKYAWVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
KF KEA EMGKGS KYAWVLD LKAERERGITID ALWKF +KYY T IDAP H D I
Sbjct: 41 KFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFI 99
Score = 62.1 bits (144), Expect = 7e-12
Identities = 27/33 (81%), Positives = 27/33 (81%)
Frame = +2
Query: 119 MGXXKTHXNIVVIGHVDSGXSTTTGHXIYKCGG 217
MG K H NIVVIGHVDSG STTTGH IYKCGG
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGG 33
Score = 54.0 bits (124), Expect = 2e-09
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVLIV G GE EAGIS GQ R
Sbjct: 101 NMITGTSQADCAVLIVAAGIGEFEAGISKNGQTR 134
Score = 24.2 bits (50), Expect = 1.8
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1
Query: 553 GVXQLIVGVXQXDST*LHPYXXPRF 627
GV QLIVGV + D T PY RF
Sbjct: 144 GVKQLIVGVNKMDMT-DPPYSEARF 167
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 72.1 bits (169), Expect = 7e-15
Identities = 33/42 (78%), Positives = 33/42 (78%)
Frame = +1
Query: 292 WVLDXLKAERERGITIDXALWKFXXSKYYXTXIDAPVHXDXI 417
WVLD LKAERERGITID ALWKF SKYY T IDAP H D I
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 42
Score = 54.0 bits (124), Expect = 2e-09
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVLIV G GE EAGIS GQ R
Sbjct: 44 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 77
Score = 26.6 bits (56), Expect = 0.34
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 553 GVXQLIVGVXQXDST*LHPYXXPRF 627
GV QLIVGV + DST PY RF
Sbjct: 87 GVKQLIVGVNKMDST-EPPYSETRF 110
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 54.0 bits (124), Expect = 2e-09
Identities = 26/34 (76%), Positives = 26/34 (76%)
Frame = +2
Query: 422 NMITGTSXADCAVLIVTVGXGEXEAGISXXGQXR 523
NMITGTS ADCAVLIV G GE EAGIS GQ R
Sbjct: 28 NMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 61
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = +1
Query: 340 DXALWKFXXSKYYXTXIDAPVHXDXI 417
D ALWKF SKYY T IDAP H D I
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFI 26
Score = 26.6 bits (56), Expect = 0.34
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +1
Query: 553 GVXQLIVGVXQXDST*LHPYXXPRF 627
GV QLIVGV + DST PY RF
Sbjct: 71 GVKQLIVGVNKMDST-EPPYSETRF 94
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.8 bits (49), Expect = 2.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 131 KTHXNIVVIGHVDSGXST 184
K H + ++GHVD G +T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,907
Number of Sequences: 438
Number of extensions: 2205
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31927896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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