Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N03
(1029 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 31 1.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.1
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 9.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 908 GGGSXXXGGCLXWXXXXXGRGGGXLXXGGXXGGFCA 801
GGG GGC G GGG GG GG CA
Sbjct: 76 GGGCGGGGGC-GGGGGGCGGGGGGCGGGGGCGGGCA 110
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXXPPXXRXPPPLPNXXXLQXRHPPXXXXPPPS 912
GGPP P + PP P P PLP +Q +H PPPS
Sbjct: 149 GGPP--PQHMMQQQGGGGPPQFVPNSS-PMPLPPQQIMQVQHQQQHQQPPPS 197
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXX---PPXXRXPPPLPNXXXLQXRHPPXXXXPPP 909
GGPP P PP PP PPP P L PP PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGGPPP 760
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXXPP---XXRXPPPLPNXXXLQXRHPPXXXXPPP 909
GGPP P + PP PP PPP P + PP PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXX---PPXXRXPPPLPNXXXLQXRHPPXXXXPPP 909
GGPP P PP PP PPP P L PP PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGGPPP 760
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXXPP---XXRXPPPLPNXXXLQXRHPPXXXXPPP 909
GGPP P + PP PP PPP P + PP PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXX---PPXXRXPPPLPNXXXLQXRHPPXXXXPPP 909
GGPP P PP PP PPP P L PP PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGGPPP 343
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +1
Query: 757 GGPPTXPXXXXXXRXAQXPPXXPP---XXRXPPPLPNXXXLQXRHPPXXXXPPP 909
GGPP P + PP PP PPP P + PP PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 373
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 805 QXPPXXPPXXRXPPPLPNXXXLQXRHPP 888
Q P P R PPP+ + Q +HPP
Sbjct: 703 QPPSGEPEHWRGPPPVSHQQQSQQQHPP 730
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 908 GGGSXXXGGCLXWXXXXXGRGGGXLXXGGXXGG 810
GGG GGC G GGG GG GG
Sbjct: 99 GGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGG 131
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 908 GGGSXXXGGCLXWXXXXXGRGGGXLXXGGXXGG 810
GGG GGC G GGG GG GG
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 908 GGGSXXXGGCLXWXXXXXGRGGGXLXXGGXXGG 810
GGG GGC G GGG GG GG
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/76 (23%), Positives = 21/76 (27%)
Frame = +3
Query: 645 APXXPPPPXKKXQXXXNPXXXXXXPTXXXXPX*GXXARXXPXXPXXGXXXXGXTEXAXXX 824
+P PPPP K +P P R P P T +
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Query: 825 PXXKXPPPSPXXPRXP 872
PPSP P P
Sbjct: 181 RNPPRTPPSPIPPPPP 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.307 0.133 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,891,205
Number of Sequences: 27780
Number of extensions: 113979
Number of successful extensions: 437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2720181880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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