Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N01
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.29
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.29
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.66
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 2.7
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 26 8.2
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.29
Identities = 28/121 (23%), Positives = 31/121 (25%), Gaps = 3/121 (2%)
Frame = +1
Query: 493 PPPXQXXSGRGXXNLXRXXXXXXXNPPPPPXXXXXXGXPXTPGXXHXPPXXXNPXXPP-- 666
PP Q S PPPPP P + +P PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTY 227
Query: 667 RXKXXXXXAQXPPRXXXAPPPXHTKXFXXPXXXR-XGXXGXXXXXPPXPPXXGXGRXPXP 843
K PP PP T P R G PP P + P P
Sbjct: 228 TPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPAT--PSQPPRP 285
Query: 844 P 846
P
Sbjct: 286 P 286
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.29
Identities = 30/118 (25%), Positives = 35/118 (29%), Gaps = 3/118 (2%)
Frame = +3
Query: 363 PNPXPQLGXXPKGLXTLALPPXVXXXGV*XKNPPLPXXXGVEXAPPXPXXXXEGXXXPXP 542
P P P G P ++A PP G PP+P APP P P P
Sbjct: 1132 PVPVPS-GAPPVPKPSVAAPPVPAPSGA----PPVPKPSVA--APPVPAPSSGIPPVPKP 1184
Query: 543 XXSXXXXEPX---PPXSXXXXXWXPXNPRGXSXXPPXPXPXXPPXXXXXXRXRPXPPP 707
P PP P P + P P PP + P P P
Sbjct: 1185 AAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 28.7 bits (61), Expect = 1.2
Identities = 31/140 (22%), Positives = 34/140 (24%), Gaps = 5/140 (3%)
Frame = +3
Query: 459 PPLPXXXGVEXAPPXPXXXXEGXXXPXPXXSXXXX-----EPXPPXSXXXXXWXPXNPRG 623
PP+P APP P + P P + P P S P P
Sbjct: 1012 PPVPKLSS--KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Query: 624 XSXXPPXPXPXXPPXXXXXXRXRPXPPPXXXXXPXLPHXXXXXSXSXPXWXXXXGXXSXA 803
S P P P P P P P P P S A
Sbjct: 1070 SSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVA 1129
Query: 804 XPPPAXXXAXXPPXXPXXXA 863
PP P P A
Sbjct: 1130 APPVPVPSGAPPVPKPSVAA 1149
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/52 (25%), Positives = 16/52 (30%)
Frame = +2
Query: 575 PXLXXXXXXAPXKPPGXXXXPPXXXTLXXPXXXXXXAXPPXPPPGXGXXPXP 730
P + P PP P ++ P PP P P G P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.2 bits (55), Expect = 6.2
Identities = 28/131 (21%), Positives = 34/131 (25%), Gaps = 3/131 (2%)
Frame = +3
Query: 459 PPLPXXXGVEXAPPXPXXXXEGXXXPXPXXSXXXXEPX---PPXSXXXXXWXPXNPRGXS 629
PP+P APP P P P + +P PP P P+
Sbjct: 1092 PPVPKPSVA--APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA--PPVPKPSV 1147
Query: 630 XXPPXPXPXXPPXXXXXXRXRPXPPPXXXXXPXLPHXXXXXSXSXPXWXXXXGXXSXAXP 809
PP P P P P P P +P P
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 810 PPAXXXAXXPP 842
PP + PP
Sbjct: 1208 PPVPPPSTAPP 1218
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.5 bits (63), Expect = 0.66
Identities = 28/118 (23%), Positives = 31/118 (26%)
Frame = +1
Query: 493 PPPXQXXSGRGXXNLXRXXXXXXXNPPPPPXXXXXXGXPXTPGXXHXPPXXXNPXXPPRX 672
PPP RG + PPPPP G P P P PPR
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAP----PPPPPR- 367
Query: 673 KXXXXXAQXPPRXXXAPPPXHTKXFXXPXXXRXGXXGXXXXXPPXPPXXGXGRXPXPP 846
P PP ++ P G P PP R PP
Sbjct: 368 -------SAPSTGRQPPPLSSSRAVSNPPAPPPAIPG--RSAPALPPLGNASRTSTPP 416
Score = 27.9 bits (59), Expect = 2.0
Identities = 29/115 (25%), Positives = 31/115 (26%), Gaps = 1/115 (0%)
Frame = +3
Query: 393 PKGLXTLALPPXVXXXGV*XKNPPLPXXXGVEXAPPXPXXXXEGXXXPX-PXXSXXXXEP 569
P+G PP + PPL V PP P G P P
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSN-PPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 570 XPPXSXXXXXWXPXNPRGXSXXPPXPXPXXPPXXXXXXRXRPXPPPXXXXXPXLP 734
PP P P PP P PP P PP P LP
Sbjct: 414 TPPV--------PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/101 (21%), Positives = 27/101 (26%), Gaps = 8/101 (7%)
Frame = +1
Query: 568 PPPPPXXXXXXGXPXTPGXXHXP----PXXXN----PXXPPRXKXXXXXAQXPPRXXXAP 723
P PPP P +P P P + P PP + + P
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 724 PPXHTKXFXXPXXXRXGXXGXXXXXPPXPPXXGXGRXPXPP 846
PP + P PP P G P PP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +2
Query: 572 PPXLXXXXXXAPXKPPGXXXXPPXXXTLXXPXXXXXXAXPPXPPPGXGXXP 724
PP L AP PP PP + P P PPP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGM--PAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 8.2
Identities = 20/92 (21%), Positives = 22/92 (23%)
Frame = +3
Query: 459 PPLPXXXGVEXAPPXPXXXXEGXXXPXPXXSXXXXEPXPPXSXXXXXWXPXNPRGXSXXP 638
PP P + P P P P + PP S P P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP--PAPPPAIP 396
Query: 639 PXPXPXXPPXXXXXXRXRPXPPPXXXXXPXLP 734
P PP P P P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.5 bits (58), Expect = 2.7
Identities = 24/95 (25%), Positives = 25/95 (26%)
Frame = +3
Query: 420 PPXVXXXGV*XKNPPLPXXXGVEXAPPXPXXXXEGXXXPXPXXSXXXXEPXPPXSXXXXX 599
PP G PP+ G E PP P G P P E PP
Sbjct: 249 PPMHHEPGEHMPPPPMHHEPG-EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 600 WXPXNPRGXSXXPPXPXPXXPPXXXXXXRXRPXPP 704
P P P PP P PP
Sbjct: 308 GEHMPPPPMHHEPGEHMP-PPPMHHEPGEHMPPPP 341
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/82 (25%), Positives = 22/82 (26%)
Frame = +3
Query: 459 PPLPXXXGVEXAPPXPXXXXEGXXXPXPXXSXXXXEPXPPXSXXXXXWXPXNPRGXSXXP 638
PP+ G E PP P G P P E PP P P
Sbjct: 210 PPMHHKPG-EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 639 PXPXPXXPPXXXXXXRXRPXPP 704
P PP P PP
Sbjct: 269 GEHMP-PPPMHHEPGEHMPPPP 289
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/37 (29%), Positives = 12/37 (32%)
Frame = +2
Query: 605 PXKPPGXXXXPPXXXTLXXPXXXXXXAXPPXPPPGXG 715
P PP P + P PP PPP G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,030,773
Number of Sequences: 5004
Number of extensions: 29580
Number of successful extensions: 95
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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