Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_N01
         (882 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.57 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.57
 Identities = 21/82 (25%), Positives = 24/82 (29%)
 Frame = +2

Query: 605 PXKPPGXXXXPPXXXTLXXPXXXXXXAXPPXPPPGXGXXPXPXTXXXSXLXXXSXVAXXX 784
           P   PG    PP    +  P        PP  PP     P P     +        +   
Sbjct: 238 PGMQPGMQPRPPSAQGMQRPPMMGQP--PPIRPPNPMGGPRPQISPQNSNLSGGMPSGMV 295

Query: 785 GXXFXRPXPPXXGXGGXPXXPP 850
           G     P PP    GG P  PP
Sbjct: 296 GP----PRPPMPMQGGAPGGPP 313


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 728 GGGAXXXRGGXWAXXXXXXXRGGXXGXWXXGG 633
           GGG    RGG          RGG  G    GG
Sbjct: 65  GGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGG 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,369
Number of Sequences: 2352
Number of extensions: 9290
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)