Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_M22
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 62 5e-10
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 62 5e-10
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 62 5e-10
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 62 7e-10
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 62 7e-10
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 57 2e-08
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 57 2e-08
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 57 2e-08
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 57 2e-08
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 54 2e-07
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 53 2e-07
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 53 2e-07
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 52 6e-07
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 50 2e-06
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 49 4e-06
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 48 7e-06
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 46 4e-05
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 44 1e-04
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 42 6e-04
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 38 0.007
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 38 0.010
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 37 0.017
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 36 0.039
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 36 0.052
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 36 0.052
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 36 0.052
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 31 1.5
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 30 2.6
U41034-1|AAN72428.1| 117|Caenorhabditis elegans Hypothetical pr... 29 4.5
U23183-1|AAY86251.1| 117|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin prot... 29 6.0
AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin prot... 29 6.0
AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin prot... 29 6.0
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 28 7.9
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 62.1 bits (144), Expect = 5e-10
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +3
Query: 393 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 563
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 564 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ +P T+A P D ++I SYYQWVP L FYIP +W
Sbjct: 77 YYLP----LTSAFPLEYGDRRARQI-SYYQWVPFVLALEALCFYIPCIMW 121
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 62.1 bits (144), Expect = 5e-10
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +3
Query: 393 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 563
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 564 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ +P T+A P D ++I SYYQWVP L FYIP +W
Sbjct: 77 YYLP----LTSAFPLEYGDRRARQI-SYYQWVPFVLALEALCFYIPCIMW 121
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 62.1 bits (144), Expect = 5e-10
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Frame = +3
Query: 393 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYT 563
V D+ V +++Y TSAI+F I+V+A +G PI C +CW+ T
Sbjct: 17 VDDDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWVPAQFTDAWEQYTENYCWVENT 76
Query: 564 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ +P T+A P D ++I SYYQWVP L FYIP +W
Sbjct: 77 YYLP----LTSAFPLEYGDRRARQI-SYYQWVPFVLALEALCFYIPCIMW 121
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = +3
Query: 381 IDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCW 551
++ V D+ V R+HY TS ++ + +LV+A +G PI C +CW
Sbjct: 19 LEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCW 78
Query: 552 ITYTFTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ T+ +P P DD + ++I YYQWVP + TF+IP +W
Sbjct: 79 VQNTYWVPFQD----LIPHRLDDRERRQI-GYYQWVPFVLAVAALTFHIPSSVW 127
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = +3
Query: 381 IDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCW 551
++ V D+ V R+HY TS ++ + +LV+A +G PI C +CW
Sbjct: 19 LEPRVDDDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQYTENYCW 78
Query: 552 ITYTFTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ T+ +P P DD + ++I YYQWVP + TF+IP +W
Sbjct: 79 VQNTYWVPFQD----LIPHRLDDRERRQI-GYYQWVPFVLAVAALTFHIPSSVW 127
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 569
D+ V R+ Y T+ +L I+V+ +G I C G +C+I TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIWXNWXKK 731
+P + PG +D + I YYQWVP+ + FY+P WIW + K+
Sbjct: 81 IPERSEI----PGDVEDRQKAEI-GYYQWVPIVLAIQAFMFYLPSWIWSSLYKQ 129
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 569
D+ V R+ Y T+ +L I+V+ +G I C G +C+I TF
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGGWEQYAEDYCFIQNTFF 80
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIWXNWXKK 731
+P + PG +D + I YYQWVP+ + FY+P WIW + K+
Sbjct: 81 IPERSEI----PGDVEDRQKAEI-GYYQWVPIVLAIQAFMFYLPSWIWSSLYKQ 129
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC-ISDGANPG--HVINTFCWITYTFT 569
D+ V R++Y T IL +CC++++A G PI C ++ + I ++CWI T+
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 80
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P + H +EK+I YYQWVP + F +P W
Sbjct: 81 IPMYENVPDDHTA----REEKQI-GYYQWVPFILIAEALMFSLPCIFW 123
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC-ISDGANPG--HVINTFCWITYTFT 569
D+ V R++Y T IL +CC++++A G PI C ++ + I ++CWI T+
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEYIESYCWIQNTYW 96
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P + H +EK+I YYQWVP + F +P W
Sbjct: 97 IPMYENVPDDHTA----REEKQI-GYYQWVPFILIAEALMFSLPCIFW 139
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 569
D + R++Y +T++IL +L+ A N +GEP+ C + G ++C+I T+
Sbjct: 22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQCWTPNQFAGGWESFAESYCFIENTYF 81
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P S A + E R YYQWVP V+ F +P W
Sbjct: 82 VPMQDSNLPAA-----ETREGREMIYYQWVPFLLVIQALFFCVPRAFW 124
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Frame = +3
Query: 402 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACISD---GANPGHVINTFCWITYTFTM 572
+ V R+H T +L +LV+ G+P+ C+ ++ +CW + T+ +
Sbjct: 20 DFVDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYV 79
Query: 573 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
P T++ A GL D +R SYYQWVP +L F +P +W
Sbjct: 80 P--TNEPVA--GLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLW 122
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Frame = +3
Query: 402 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACISD---GANPGHVINTFCWITYTFTM 572
+ V R+H T +L +LV+ G+P+ C+ ++ +CW + T+ +
Sbjct: 20 DFVDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYAENYCWASDTYYV 79
Query: 573 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
P T++ A GL D +R SYYQWVP +L F +P +W
Sbjct: 80 P--TNEPVA--GLQSDEKRQRKISYYQWVPFFLLLEAACFRLPSLLW 122
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 52.4 bits (120), Expect = 4e-07
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Frame = +3
Query: 339 LVSSVAGFVKVRYLIDKAVID---NMVFRMHYRITSAILFLCCILVTANNLIGEPIACIS 509
+ S V V LI + + ++ R++ R+T IL + L+ +++ IG+PI C +
Sbjct: 1 MASQVGAINSVNALISRVFVQPKGDLADRLNSRVTVVILAVSSALLLSSHFIGDPITCWT 60
Query: 510 DG---ANPGHVINTFCWITYTFTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLP 680
A + +N +C++ T+ +P ++ K YYQWVP L
Sbjct: 61 PAQFNAQWVNFVNQYCFVHGTYFVPLDQQLA-----FEEEERTKVSIQYYQWVPYVFALQ 115
Query: 681 XPTFYIPHWIW 713
FYIP +IW
Sbjct: 116 AFLFYIPRFIW 126
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 52.0 bits (119), Expect = 6e-07
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 393 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC--ISDGANP-GHVINTFCWITYT 563
V D+++ +++Y T+AI+ + ILV+A +G PI C + P +CW+ T
Sbjct: 19 VDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNT 78
Query: 564 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ +P H E R YYQWVP L FY+P +W
Sbjct: 79 YFLP--LHDYIPH---NYAERENRQIGYYQWVPFVLALEALLFYVPTIVW 123
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 52.0 bits (119), Expect = 6e-07
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 393 VIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIAC--ISDGANP-GHVINTFCWITYT 563
V D+++ +++Y T+AI+ + ILV+A +G PI C + P +CW+ T
Sbjct: 19 VDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQYTENYCWVQNT 78
Query: 564 FTMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ +P H E R YYQWVP L FY+P +W
Sbjct: 79 YFLP--LHDYIPH---NYAERENRQIGYYQWVPFVLALEALLFYVPTIVW 123
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCWITYTFTMPNTT 584
R++ R+T IL + L+ +++ IG+PI C + A + +N +C++ T+ +P
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITCWTPAQFNAQWVNFVNQYCFVHGTYFVPLDQ 62
Query: 585 SKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
++ K YYQWVP L FYIP +IW
Sbjct: 63 QLA-----FEEEERTKVSIQYYQWVPYVFALQAFLFYIPRFIW 100
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 5/120 (4%)
Frame = +3
Query: 369 VRYLIDKAVIDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVIN 539
VR A +++ R Y+ TS +L I++ A+ +G PI C
Sbjct: 9 VRKFQRSAESNDIADRFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRTWEKYAE 68
Query: 540 TFCWITYTFTMPNTTSKTAAHPGLGDDNDEKRIHS--YYQWVPVHAVLPXPTFYIPHWIW 713
T+C+I T+ +P + D+ YYQW+P+ VL FY+P IW
Sbjct: 69 TYCFIKGTYFLPGAFASEGEMSVTSPDDAVTATPQVGYYQWIPIVLVLQAFLFYLPSIIW 128
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACIS----DGANPGHVINTFCWITYTFTMPNT 581
R++ T +L + ++ G+PI C + G+ G+V + FC+I T+ +PN
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYV-HDFCFIENTYFVPNG 88
Query: 582 TSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIWXNWXKKNPSDSKG 752
T T D+ R +YY+WVP+ + F +P+ +W + K+ + KG
Sbjct: 89 TEVT-------DEARGGRHINYYRWVPLVLLFQAAMFVLPYHLWNLFHKRTTINLKG 138
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 48.4 bits (110), Expect = 7e-06
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACIS----DGANPGHVINTFCWITYTFTMPNT 581
R++ T +L + ++ G+PI C + G+ G+V + FC+I T+ +PN
Sbjct: 30 RVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFSGSWDGYV-HDFCFIENTYFVPNG 88
Query: 582 TSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIWXNWXKKNPSDSKG 752
T T D+ R +YY+WVP+ + F +P+ +W + K+ + KG
Sbjct: 89 TEVT-------DEARGGRHINYYRWVPLVLLFQAAMFVLPYHLWNLFHKRTTINLKG 138
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGH---VINTFCWITYTFT 569
D++ R+HY T+ L L +L++ G PI C +CW T+
Sbjct: 45 DDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPIECWLPAEYKSSWEDYTEMYCWARNTYV 104
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIWXNWXKKN 734
T + P + N E + SYYQWVP V +FY P IW + K+
Sbjct: 105 ---TAFEDDNLPEVV--NREYTMVSYYQWVPFFLVYVAFSFYAPCLIWRLFYDKS 154
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 569
D+ R++Y +T IL +L++ G PI C+ PG +CW T+
Sbjct: 20 DDWSDRLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGSWEQYAENYCWSQDTYF 79
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ T + D + SYYQWVP +L F P ++W
Sbjct: 80 VEPTQDVSLLKKEERYTPDRQL--SYYQWVPFFLLLQAAFFRAPSYLW 125
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDG---ANPGHVINTFCWITYTFT 569
D+ V R+ Y TS+ L + +LV+ G P+ C A+ +CW T+
Sbjct: 56 DDFVDRLSYFYTSSFLIMMAVLVSFKQFGGRPLECWVPAQFTASWEAYTEMYCWAQNTYW 115
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P + E R SYYQWVP +L +YIP +W
Sbjct: 116 VPIDQDIP-----VDISEREYRQISYYQWVPFFLLLQAFLYYIPCLMW 158
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHV---INTFCWITYTFT 569
D+ V +++Y T+ IL +LV+A +G PI C + +CW+ T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P P ++I YYQWVP + FY+P +W
Sbjct: 199 VPMQEDI----PREIYSRRNRQI-GYYQWVPFILAIEALLFYVPCILW 241
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHV---INTFCWITYTFT 569
D+ V +++Y T+ IL +LV+A +G PI C + +CW+ T+
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQYTENYCWVQNTYW 198
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P P ++I YYQWVP + FY+P +W
Sbjct: 199 VPMQEDI----PREIYSRRNRQI-GYYQWVPFILAIEALLFYVPCILW 241
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 569
D+ + R++Y T +L + + ++A +G+PI C G +C++ T+
Sbjct: 17 DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQCWIPAQFTGAWEQYSENYCFVQNTYF 76
Query: 570 MPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+ S P D + I YYQWVP L FY+P W
Sbjct: 77 I----SPDKYIPDSEIDREGAEI-GYYQWVPFILGLQAILFYLPSLFW 119
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 38.3 bits (85), Expect = 0.007
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANP---GHVINTFCWITYTFT 569
DN R+ + T IL LV++N + G+PI C+ P + + FC+
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLMLPETPDSSANYFHDFCFYQDKLR 79
Query: 570 MP--NTTSKTAAHPGLGDDND---EKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
+P + K + G + N+ ++ +YYQW P L +P +W
Sbjct: 80 IPPLHNAVKRSTRQGTMNINNIMPQEVAVTYYQWTPFIIFLQVAMCLVPALMW 132
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +3
Query: 396 IDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTF 566
ID+ + IT+ + + IL +A + +G + C G +C++ T+
Sbjct: 19 IDDASDTLSCLITAFLFIIAAILTSAQSYVGSAMECWLPQTYSGAWEEFAENYCFLKDTY 78
Query: 567 TMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
P S T + + E+ +YYQW ++ + F IP +IW
Sbjct: 79 FYPRQQSMT----DIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFIW 123
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 37.9 bits (84), Expect = 0.010
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Frame = +3
Query: 399 DNMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFT 569
D+ + R++++ ++ + L +++ + G I+C + G +C I T+
Sbjct: 18 DDFIDRLNFQYSAYVFALSALVIGYHTYFGRAISCWTPAEFKGGWNEYTTDYCLIENTYY 77
Query: 570 MPNTTSKTAAHPGLGDDN--DEKRIHSYYQWVPVHAVLPXPTFYIPHWIW--XNW 722
+P P + + +EK + SYYQWV V FY+P+ W NW
Sbjct: 78 VP------LEDPNMPPERYREEKEL-SYYQWVQFILVFLAFLFYLPYLYWSTVNW 125
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 37.1 bits (82), Expect = 0.017
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 12/116 (10%)
Frame = +3
Query: 402 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTM 572
+ V +++Y T+ L L +T + +G PI C G +C++ TF +
Sbjct: 18 DFVDKLNYCATTIGLVLASAFITGWSFVGSPIDCWFPAYYKGWWAEYALDYCYVQNTFFV 77
Query: 573 PNTTSKTAAHPG----LGDDNDEKRIHS-----YYQWVPVHAVLPXPTFYIPHWIW 713
P + K + D + + YYQWVP L FY P IW
Sbjct: 78 PFSEDKAERSYNWEQLVADKQNTTSLKQTNQIGYYQWVPFILALQAMLFYFPVVIW 133
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 36.7 bits (81), Expect = 0.022
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +3
Query: 396 IDNMVFRMHYRITSAILFLCCILVTANNLIGEPIACI---SDGANPGHVINTFCWITYTF 566
ID+ + IT+ + IL +A +G + C + + G +C++ T+
Sbjct: 19 IDDASDTLSCLITAFLFITAAILTSAKTYVGSAMECWLPQTYSGDWGEFAENYCFLKDTY 78
Query: 567 TMPNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
P S T + + E+ +YYQW ++ + F IP ++W
Sbjct: 79 FYPRQQSMT----DIPMYHKERHRLTYYQWSSMYLAVAGIAFMIPKFLW 123
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACI-----SDGANPGHVINTFCWI--TYTFTM 572
R+H T +L +L A G PI C+ D + I+ FC T+ + +
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYDV 85
Query: 573 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
N TS+ G ++ ++ YYQWVP F +P W W
Sbjct: 86 SNGTSE------FGSYTEDASVN-YYQWVPFFFAFQVCCFLLPFWCW 125
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 35.9 bits (79), Expect = 0.039
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACI-----SDGANPGHVINTFCWI--TYTFTM 572
R+H T +L +L A G PI C+ D + I+ FC T+ + +
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCMLPKQHDDLKSWRDYIHNFCLFYGTFRYDV 85
Query: 573 PNTTSKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
N TS+ G ++ ++ YYQWVP F +P W W
Sbjct: 86 SNGTSE------FGSYTEDASVN-YYQWVPFFFAFQVCCFLLPFWCW 125
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 35.5 bits (78), Expect = 0.052
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTMPNTT 584
R+ Y T +L + A +G+ I C + G ++C I T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 585 SKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
S P + ++ + K YYQWVP YIP IW
Sbjct: 83 SNLPG-PAIRENKELK----YYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 35.5 bits (78), Expect = 0.052
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTMPNTT 584
R+ Y T +L + A +G+ I C + G ++C I T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 585 SKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
S P + ++ + K YYQWVP YIP IW
Sbjct: 83 SNLPG-PAIRENKELK----YYQWVPFILFGLAVVIYIPRVIW 120
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 35.5 bits (78), Expect = 0.052
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPG---HVINTFCWITYTFTMPNTT 584
R+ Y T +L + A +G+ I C + G ++C I T+ +
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQCWAPKQFKGGWEEYAESYCLIENTYYVHMNN 82
Query: 585 SKTAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
S P + ++ + K YYQWVP YIP IW
Sbjct: 83 SNLPG-PAIRENKELK----YYQWVPFILFGLAVVIYIPRVIW 120
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 30.7 bits (66), Expect = 1.5
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
Frame = +3
Query: 402 NMVFRMHYRITSAILFLCCILVTANNLIGEPIACI--SDGANPG-HVINTFCWITYTFTM 572
++V +H +TS +L +L++ G PI C+ D + N +CW T+ +
Sbjct: 20 DLVASIHSFLTSNLLVGLAVLISWKQFGGTPIECMVPLDFTSAWVQYSNNYCWAQPTYFI 79
Query: 573 PNTTS--KTAAHPG--------LGDDNDEKRI-------HSYYQWVPVHAVLPXPTFYIP 701
P T + P +G+ + R SYYQW+ + F +P
Sbjct: 80 PFTEELVEQVVDPADVVADGITIGNGGNRPRFVKKGGEKISYYQWMSFFLLFEAACFRLP 139
Query: 702 HWIW 713
+IW
Sbjct: 140 CFIW 143
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 29.9 bits (64), Expect = 2.6
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 4/104 (3%)
Frame = +3
Query: 414 RMHYRITSAILFLCCILVTANNLIGEPIACISDGANPGHVINTFCWITYTFTMPNTTSK- 590
++ + T AIL IL+ + + G PI C P ++ F I Y +
Sbjct: 25 KLLHNTTIAILVFLFILLASKPMFGSPIVCQVPKDWPSSSVDYFTDICYYGQREKVDIQH 84
Query: 591 ---TAAHPGLGDDNDEKRIHSYYQWVPVHAVLPXPTFYIPHWIW 713
A G N +Y WVP+ +L +P + W
Sbjct: 85 RISRAGGRGTVTVNLTTGTSEFYMWVPLVPILLVALCLLPAFFW 128
>U41034-1|AAN72428.1| 117|Caenorhabditis elegans Hypothetical
protein M02D8.6 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 462 LVTANNLIGEPIACISDGANPGHVINTFCWIT 557
++T N G P D NP ++IN+FC+I+
Sbjct: 51 VITYNGKTG-PTTVFKDDPNPNNLINSFCYIS 81
>U23183-1|AAY86251.1| 117|Caenorhabditis elegans Hypothetical
protein K01A12.4 protein.
Length = 117
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 462 LVTANNLIGEPIACISDGANPGHVINTFCWIT 557
++T N G P D NP ++IN+FC+I+
Sbjct: 51 VITYNGKTG-PTTVFKDDPNPNNLINSFCYIS 81
>AC006638-5|AAP82655.1| 175|Caenorhabditis elegans Stomatin protein
5, isoform c protein.
Length = 175
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 384 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 265
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 4 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 43
>AC006638-4|AAP82654.1| 312|Caenorhabditis elegans Stomatin protein
5, isoform b protein.
Length = 312
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 384 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 265
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 88 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 127
>AC006638-3|AAK85483.1| 367|Caenorhabditis elegans Stomatin protein
5, isoform a protein.
Length = 367
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 384 RSDSGLSRSPLLMIPNRKQPSLMISLTILFSNLTVIRNFP 265
RS S L R+ L+ R+ P L+ + ++FS L ++ +FP
Sbjct: 88 RSQSWLIRTRHLLHEEREPPPLISHMMLIFSFLLILLSFP 127
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 28.3 bits (60), Expect = 7.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 696 IPHWIWXNWXKKNPS 740
I WIW NW K NP+
Sbjct: 338 ITWWIWTNWRKANPN 352
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,919,569
Number of Sequences: 27780
Number of extensions: 364173
Number of successful extensions: 987
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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