SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_M19
         (920 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X07517-1|CAA30395.2|  236|Homo sapiens salivary proline-rich pro...    33   1.9  
X07516-1|CAA30394.2|  297|Homo sapiens salivary proline-rich pro...    33   1.9  
S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.                   33   1.9  
S62941-1|AAB27289.1|  358|Homo sapiens Ps 2 protein.                   33   1.9  
S62928-1|AAB27288.2|  297|Homo sapiens PRB1M protein precursor p...    33   1.9  
S52986-1|AAA13341.2|  331|Homo sapiens basic salivary proline-ri...    33   1.9  
M97220-1|AAB05816.1|  331|Homo sapiens salivary proline-rich pro...    33   1.9  
K03204-1|AAA60185.1|  331|Homo sapiens PRB1 protein.                   33   1.9  
BC044827-1|AAH44827.1|  338|Homo sapiens PRB2 protein protein.         33   1.9  
BC096212-1|AAH96212.1|  162|Homo sapiens PRB3 protein protein.         32   3.4  
X07704-1|CAA30542.1|  234|Homo sapiens Po protein protein.             31   4.5  
K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.                   31   4.5  
K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary ...    31   4.5  
BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.         31   4.5  

>X07517-1|CAA30395.2|  236|Homo sapiens salivary proline-rich
           protein protein.
          Length = 236

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 15  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 74

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 75  QGPPPPPG 82



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 76  GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPRKPQGPPPQGGNQP 135

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 136 QGPPPPPG 143



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 137 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN 196

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 197 PQGPPPPAGGNPQQPQAPPAGQP 219


>X07516-1|CAA30394.2|  297|Homo sapiens salivary proline-rich
           protein protein.
          Length = 297

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 15  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 74

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 75  QGPPPPPG 82



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 76  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 135

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 136 QGPPPPPG 143



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 198 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 257

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 258 PQGPPPPAGGNPQQPQAPPAGQP 280


>S80905-1|AAB50686.1|  382|Homo sapiens Con1 protein.
          Length = 382

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 36  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 95

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 96  QGPPPPPG 103


>S62941-1|AAB27289.1|  358|Homo sapiens Ps 2 protein.
          Length = 358

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 15  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 74

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 75  QGPPPPPG 82



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 76  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 135

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 136 QGPPPPPG 143



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 137 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 196

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 197 QGPPPPPG 204


>S62928-1|AAB27288.2|  297|Homo sapiens PRB1M protein precursor
           protein.
          Length = 297

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 15  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 74

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 75  QGPPPPPG 82



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 76  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 135

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 136 QGPPPPPG 143



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 198 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 257

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 258 PQGPPPPAGGNPQQPQAPPAGQP 280


>S52986-1|AAA13341.2|  331|Homo sapiens basic salivary proline-rich
           protein protein.
          Length = 331

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 49  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 108

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 109 QGPPPPPG 116



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 110 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 169

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 170 QGPPPPPG 177



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 232 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 291

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 292 PQGPPPPAGGNPQQPQAPPAGQP 314


>M97220-1|AAB05816.1|  331|Homo sapiens salivary proline-rich
           protein protein.
          Length = 331

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 49  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 108

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 109 QGPPPPPG 116



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 110 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 169

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 170 QGPPPPPG 177



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 232 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 291

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 292 PQGPPPPAGGNPQQPQAPPAGQP 314


>K03204-1|AAA60185.1|  331|Homo sapiens PRB1 protein.
          Length = 331

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 49  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 108

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 109 QGPPPPPG 116



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 110 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 169

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 170 QGPPPPPG 177



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 232 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 291

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 292 PQGPPPPAGGNPQQPQAPPAGQP 314


>BC044827-1|AAH44827.1|  338|Homo sapiens PRB2 protein protein.
          Length = 338

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 56  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 115

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 116 QGPPPPPG 123



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXP 429
           GPP     P   PP GG  P    PP  P+       K      P     GP       P
Sbjct: 117 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQGPPPQGGNQP 176

Query: 428 XXXPXXPG 405
              P  PG
Sbjct: 177 QGPPPPPG 184



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 239 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 298

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 299 PQGPPPPAGGNPQQPQAPPAGQP 321


>BC096212-1|AAH96212.1|  162|Homo sapiens PRB3 protein protein.
          Length = 162

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXPXXPPXNP 522
           GPP     P   PP GG  P  PP +P
Sbjct: 70  GPPPRPGKPEGQPPQGGNKPQGPPPHP 96


>X07704-1|CAA30542.1|  234|Homo sapiens Po protein protein.
          Length = 234

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = -2

Query: 667 GGXPXGGXXXKXXPXGXXXRXGAPPXXXXXXXFPPRGGGGXXXXPPETPG 518
           G  P  G   +  P G     G PP        PP+GG      PP TPG
Sbjct: 36  GPPPHPGKPERPPPQGGNQSQGPPPHPGKPERPPPQGGN-QSQGPPPTPG 84


>K03205-1|AAA60186.1|  198|Homo sapiens PRB1 protein.
          Length = 198

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 99  GPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 158

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 159 PQGPPPPAGGNPQQPQAPPAGQP 181


>K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary
           proline-rich protein 1 gene, segment 1. ).
          Length = 173

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 20/76 (26%), Positives = 24/76 (31%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXPXXPPXNPRXGAXXXKKXXRXXXPXXXFPGPXKGXQXXPXX 423
           GPP     P   PP GG  P  PP   +      +   R   P    PG  +G       
Sbjct: 32  GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSPRSP-PGKPQGPPPQGGN 90

Query: 422 XPXXPGXLXNX*KNPP 375
            P  P       + PP
Sbjct: 91  QPQGPPPPPGKPQGPP 106


>BC141917-1|AAI41918.1|  198|Homo sapiens PRB1 protein protein.
          Length = 198

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 23/83 (27%), Positives = 26/83 (31%), Gaps = 3/83 (3%)
 Frame = -1

Query: 602 GPPXXXXXPXXSPPGGGGXP--XXPPXNPR-XGAXXXKKXXRXXXPXXXFPGPXKGXQXX 432
           GPP     P   PP GG  P    PP  P+   A    K      P     GP +     
Sbjct: 99  GPPPQGGKPQGPPPQGGNKPQGPLPPGKPQGPPAQGGSKSQSARAPPGKPQGPPQQEGNN 158

Query: 431 PXXXPXXPGXLXNX*KNPPGXXP 363
           P   P   G      + PP   P
Sbjct: 159 PQGPPPPAGGNPQQPQAPPAGQP 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,630,332
Number of Sequences: 237096
Number of extensions: 1304823
Number of successful extensions: 3374
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2989
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -