Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_M16
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 335 2e-92
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 335 2e-92
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 335 2e-92
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.5
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 4.7
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 335 bits (824), Expect = 2e-92
Identities = 158/212 (74%), Positives = 178/212 (83%)
Frame = +1
Query: 199 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 378
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 379 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 558
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 559 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 738
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 739 SVTKSKFDNLYGCRESWLDGIKRAQT**LPGK 834
SVTKSKFDNLYG RES DGIKRA L GK
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGK 216
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 801 QKGTDIMIAXKICVXAGYGDLGK-DAPNVQRFGG*MIV 911
++ TD+M+A K+ V AGYGD+GK A +++ FG +IV
Sbjct: 206 KRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIV 243
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 335 bits (824), Expect = 2e-92
Identities = 158/212 (74%), Positives = 178/212 (83%)
Frame = +1
Query: 199 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 378
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 379 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 558
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 559 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 738
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 739 SVTKSKFDNLYGCRESWLDGIKRAQT**LPGK 834
SVTKSKFDNLYG RES DGIKRA L GK
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGK 216
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 801 QKGTDIMIAXKICVXAGYGDLGK-DAPNVQRFGG*MIV 911
++ TD+M+A K+ V AGYGD+GK A +++ FG +IV
Sbjct: 206 KRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIV 243
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 335 bits (824), Expect = 2e-92
Identities = 158/212 (74%), Positives = 178/212 (83%)
Frame = +1
Query: 199 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 378
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 379 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 558
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 559 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVND 738
+PLNMILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVND
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 739 SVTKSKFDNLYGCRESWLDGIKRAQT**LPGK 834
SVTKSKFDNLYG RES DGIKRA L GK
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGK 216
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/38 (47%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 801 QKGTDIMIAXKICVXAGYGDLGK-DAPNVQRFGG*MIV 911
++ TD+M+A K+ V AGYGD+GK A +++ FG +IV
Sbjct: 206 KRATDVMLAGKVAVVAGYGDVGKGSAASLKAFGSRVIV 243
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -1
Query: 462 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 304
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 622 PDLLKDVKGITEETTTGVHNL 684
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,867,116
Number of Sequences: 27780
Number of extensions: 454675
Number of successful extensions: 1016
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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