Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_M15
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0576 + 25765137-25766420 31 1.6
06_01_0461 - 3280874-3281757,3281777-3282343,3282398-3283249,328... 30 2.8
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 30 2.8
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 30 2.8
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 3.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.0
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 29 6.6
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 29 6.6
04_04_0991 - 29969162-29969912,29970097-29970368 29 6.6
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 29 6.6
03_04_0042 - 16743440-16743454,16743907-16744002,16744257-167444... 29 6.6
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 28 8.7
08_01_0059 - 394001-394708 28 8.7
>03_05_0576 + 25765137-25766420
Length = 427
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 887 AKPLPPPDXRAXGHGREPKSPXTQPPSPGVADSLCRKPPTXP 762
A P P P + +P SP PPSP A ++ PPT P
Sbjct: 67 APPSPSPSP-SPSPPPQPSSPPPPPPSPPPAAAVSVSPPTQP 107
>06_01_0461 -
3280874-3281757,3281777-3282343,3282398-3283249,
3284503-3284644
Length = 814
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -1
Query: 314 WGFSRHFLTSVEFSN--KLSLSNGTVSSVGYKFSTA-CFTPIVCFGG 183
WG+ + SV FSN + L+N + GY+ T C+ F G
Sbjct: 382 WGYDMDYAESVPFSNCRNMCLANAKCQAFGYRRRTGLCYPKYTLFNG 428
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 884 KPLPPPDXRAXGHGREPKSPXTQPPSPGVADSLCRKPPT 768
+P PPP HG P P PP G +S RKP T
Sbjct: 411 QPPPPPTHT---HGPPPPPPPPPPPPVGYWESRVRKPGT 446
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 887 AKPLPPPDXRAXGHGREPKSPXTQPPSP 804
AKP PPP RA G K + PP P
Sbjct: 34 AKPPPPPSPRANGTAAAAKPSASPPPPP 61
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -1
Query: 881 PLPPPDXRAXGHGREPKSPXTQPPSPGVADSLCRKPPTXP 762
P PPP +G +P PP P A+ R PP P
Sbjct: 714 PPPPPPPANRSNGPSAPAPPLPPPLPAAANK--RNPPAPP 751
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 887 AKPLPPPDXRAXGHGREPKSPXTQPPSPGVADSLCRKPPTXP 762
A P PPP +A PK P PP+ G K P+ P
Sbjct: 324 AAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPP 365
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1
Query: 875 PPPDXRAXGHGREPKSPXTQPPSP 804
PPP R GHG P +P PP P
Sbjct: 139 PPPPNREPGHGYHP-APAFYPPQP 161
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -1
Query: 881 PLPPPDXRAXG-HGREPKSPXTQPPSPGVADSLCRKPP 771
PL PP A H + P P QPP P V L PP
Sbjct: 708 PLQPPARPAQHPHLQPPARPAQQPPRPPVTQPLPPPPP 745
>04_04_0991 - 29969162-29969912,29970097-29970368
Length = 340
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -1
Query: 872 PPDXRAXGHGREPKSPXTQPPSPGVADSL 786
PPD A G G SP PP P A +L
Sbjct: 133 PPDLLADGGGLGAASPLLSPPGPAAAAAL 161
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 884 KPLPPPDXRAXGHGREPKSPXTQPPSPGV 798
+P P RA H EPK P PP+P V
Sbjct: 56 QPAPRGGKRAASHAAEPKKP-APPPAPAV 83
>03_04_0042 -
16743440-16743454,16743907-16744002,16744257-16744475,
16744830-16744910,16745092-16745187,16745981-16746045,
16746131-16746217,16746522-16746720
Length = 285
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -1
Query: 878 LPPPDXRAXGHGREPKSPXTQPPSPGVADS--LCRKP 774
+PPP G P+ P PP P +A + L R+P
Sbjct: 1 MPPPTALLPGRSAAPRPPPPPPPPPQLASAARLSRRP 37
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 283 TEVKKCLENPHVREILELLDSSANP-DELVQ 372
+E+++C ENP V E+ + LDS N D LV+
Sbjct: 139 SELRQCRENPRVSELEKDLDSRKNEIDRLVR 169
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 875 PPPDXRAXGHGREPKSPXTQPPSPGVADSLCRKPPTXPL 759
PPP RA P SP +PP P PP+ PL
Sbjct: 18 PPPPRRAP----PPPSPPIRPPPPPTPRPYAPPPPSHPL 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,936,975
Number of Sequences: 37544
Number of extensions: 385627
Number of successful extensions: 1308
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1294
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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