Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_M13
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.57
07_01_0080 + 587674-588510 32 0.57
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 0.58
02_01_0302 - 2021221-2023305 31 1.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.7
05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724 30 3.0
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.0
04_01_0034 - 401208-402923 29 5.3
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.3
06_03_1363 - 29576265-29577575 29 7.0
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 9.3
05_07_0236 - 28582157-28582552,28582639-28582911,28583324-285835... 28 9.3
03_04_0191 - 18293842-18294273 28 9.3
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.57
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXP 545
PPPP G F P P PPP P
Sbjct: 551 PPPPSGNKPAFSPPPPPPPPPPP 573
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPP 536
PPP G G F P P PPP
Sbjct: 652 PPPAPGIGNKFPAPPPPPPP 671
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 479 PPPXGXGXXFXGPXPLXPPKXPXPPVXXXGXGFSXP 586
PPP G F P P PP P PP+ S P
Sbjct: 552 PPPSGNKPAFSPPPP--PPPPPPPPLPQSNYASSQP 585
>07_01_0080 + 587674-588510
Length = 278
Score = 32.3 bits (70), Expect = 0.57
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 444 GGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXP 551
GG F PPPP P P PPP P P
Sbjct: 83 GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPP 118
Score = 31.9 bits (69), Expect = 0.75
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXP 551
P GG PPPP G P P PPP P P
Sbjct: 80 PRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXP 551
PPPP P P PPP P P
Sbjct: 96 PPPPSSGSPPPPPPPPPPPPPPPPP 120
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 480 PPPXGXGXXFXXPXPXPPPKXPXP 551
PPP G F P P PPP P P
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPP 65
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPR 554
PPPP P P PPP P PR
Sbjct: 109 PPPPPPSPPPSAPPPPPPPPTQPPPR 134
Score = 29.9 bits (64), Expect(2) = 0.58
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXP 545
PPPP G P P PPP P
Sbjct: 95 PPPPYGVNSSQPPPPPPPPPSPP 117
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXP 551
PPPP G P P PPP P
Sbjct: 93 PPPPPPYGVNSSQPPPPPPPPPSPP 117
Score = 21.0 bits (42), Expect(2) = 0.58
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPP 488
P P G F PPPP
Sbjct: 42 PPPQGAPPPFLAPPPPPPP 60
>02_01_0302 - 2021221-2023305
Length = 694
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/56 (26%), Positives = 19/56 (33%)
Frame = +3
Query: 426 FFPVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXG 593
+ P PGG + PP P P P PP P P + + P G
Sbjct: 385 YTPTPGGSPGR--GGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSYPAPPG 438
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 479 PPPXGXGXXFXGPXPLXPPKXPXPPVXXXGXGFSXPXXGXXGFPQXXG 622
PPP G G GP PP P PP+ G P G G P G
Sbjct: 1187 PPPRGHGGV-GGPPT--PPGAPAPPMPPGVPGGPPPPPGGRGLPAPPG 1231
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
PPPP G G P P P P P G G P GG
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMP--PGVPGGPPPPPGG 1223
>05_01_0492 - 4102379-4103494,4104105-4104383,4105395-4105724
Length = 574
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +3
Query: 480 PPPXGXGXXFXXPXPX-PPPKXPXPRFXGXGXGFXXP 587
PPP P P PPP P P F G G P
Sbjct: 394 PPPQSYPPNVRLPSPYVPPPSGPAPPFYGPNPGMYEP 430
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXP 551
PPPP G P P PPPK P P
Sbjct: 345 PPPPPAKG-----PPPPPPPKGPSP 364
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +2
Query: 479 PPPXGXGXXFXGPXPLXPPKXPXPPVXXXGXGFSXPXXGXXGFPQXXGVTP 631
PPP P P PPK PP G P G P G +P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
>04_01_0034 - 401208-402923
Length = 571
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPR 554
PPPP P P PPP P PR
Sbjct: 309 PPPPQQQRAKPSRPPPPPPPLDPPPR 334
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXP 587
P+P G PPPP P PPP P P G G G P
Sbjct: 307 PLPPGAGAGAGTGAPPPPPAHPAA------PAPPPPAPSPSAAGAGSGPPPP 352
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 480 PPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXG 593
P P G P P PP PR G G G P G
Sbjct: 338 PSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
>06_03_1363 - 29576265-29577575
Length = 436
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +3
Query: 438 PGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPK 539
PGGG PPPP P PPP+
Sbjct: 378 PGGGKVLIVDVTPPPPPPPAARRESWAAPPPPPR 411
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXP 551
PPPP F P PPP P P
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPPPP 355
>05_07_0236 -
28582157-28582552,28582639-28582911,28583324-28583560,
28583653-28583694,28583782-28583964,28584393-28584524,
28585605-28586057
Length = 571
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPR 554
PPP G G P P PP P P+
Sbjct: 98 PPPSSGSGHTLPSPPPPLPPLLPPPQ 123
>03_04_0191 - 18293842-18294273
Length = 143
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPR 554
PPPP F P P PP P P+
Sbjct: 49 PPPPPQFVKHFAPPAPVTPPPHPQPQ 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,155,234
Number of Sequences: 37544
Number of extensions: 281395
Number of successful extensions: 1670
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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