Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_M13
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 36 0.031
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.68
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.68
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.68
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 31 0.90
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 31 1.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 31 1.2
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.6
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 6.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 8.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 8.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 8.3
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 36.3 bits (80), Expect = 0.031
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +3
Query: 423 FFFPVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPP---PKXPXPRFXGXGXGFXXPXG 593
F P GGG PPPP G G P P P+ P F G G G P G
Sbjct: 17 FLLPSGGGGGCG-CAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCG 75
Query: 594 G 596
G
Sbjct: 76 G 76
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXP 551
P PGG PPPP G P P PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
P P G PPPP G P PPP P G P GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPP 536
P P GG PPPP G P P PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXP 551
P PGG PPPP G P P PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
P P G PPPP G P PPP P G P GG
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPP 536
P P GG PPPP G P P PPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXP 551
P PGG PPPP G P P PPP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
P P G PPPP G P PPP P G P GG
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPP 536
P P GG PPPP G P P PPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGC--PPPPPPPPP 360
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 31.5 bits (68), Expect = 0.90
Identities = 27/97 (27%), Positives = 29/97 (29%)
Frame = +1
Query: 343 GKXGXPXGFXXPFXXGKKNXXXXXGXXFFFPXXGXXGXXFXXXKXPPPPGEXGFXFXXXX 522
G+ G GF P G K G G G P PG+ G
Sbjct: 158 GQPGFGSGFGAPGPAGPKGQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAGPQGPPGS 217
Query: 523 PXPPQXPXXPGFXXGXXVFXXPXGXXWXSPKXGGNPG 633
P P PGF G P G P GNPG
Sbjct: 218 SGAPGAPGGPGF-PGAPGSKGPSGAP-GQPGANGNPG 252
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 492 GXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
G G + PPP P P G G G+ P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 492 GXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
G G + PPP P P G G G+ P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
P PP G G PPP P P F G G G P G
Sbjct: 56 PRPPIGYGA--------PPPPPPPPAFGGLGGGAAYPGAG 87
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
P PP G G PPP P P F G G G P G
Sbjct: 56 PRPPIGYGA--------PPPPPPPPAFGGLGGGAAYPGAG 87
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXPXGG 596
P PP G G PPP P P F G G G P G
Sbjct: 56 PRPPIGYGA--------PPPPPPPPAFGGLGGGAAYPGAG 87
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPP 536
PPPP G + P P PPP
Sbjct: 41 PPPPPPCGGGYEAPPPPPPP 60
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXP 545
P P GG PPPP P P PPP P
Sbjct: 219 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXP 545
P P GG PPPP P P PPP P
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 432 PVPGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXP 545
P P GG PPPP P P PPP P
Sbjct: 205 PPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPPP 242
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Frame = +3
Query: 423 FFFPVPGGGXXXFXXXKX-----PPPPXGXGXXFXXPXPXPPP 536
F FP+ GGG PPPP G P P PPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 438 PGGGXXXFXXXKXPPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXG 575
P GG F PPPP G G P PP P P G G
Sbjct: 426 PQGGPGGFG----PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXP 587
PPPP G P PPP P PR+ G G P
Sbjct: 335 PPPPPG----MRYPGGMPPP--PPPRYPSAGPGMYPP 365
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +2
Query: 479 PPPXGXGXXFXGPXPLXPPKXPXPP 553
PPP F P P+ PP P PP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPP 70
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 477 PPPPXGXGXXFXXPXPXPPPKXPXPRFXGXGXGFXXP 587
PPPP G P PPP P PR+ G G P
Sbjct: 345 PPPPPG----MRYPGGMPPP--PPPRYPSAGPGMYPP 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,339,819
Number of Sequences: 27780
Number of extensions: 200959
Number of successful extensions: 1348
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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