Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_M06
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical pr...    29   4.6  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U23172-6|AAV58869.1|  484|Caenorhabditis elegans Hypothetical
           protein F25B5.6c protein.
          Length = 484

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 726 DRRSHSRNINARRGDDATKSRQTTTLWRE 812
           D+ + S N+NA R + A K+ Q    W+E
Sbjct: 399 DKSADSANLNASRDEQAEKANQCVQAWKE 427


>U23172-5|AAC46527.1|  510|Caenorhabditis elegans Hypothetical
           protein F25B5.6a protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 726 DRRSHSRNINARRGDDATKSRQTTTLWRE 812
           D+ + S N+NA R + A K+ Q    W+E
Sbjct: 425 DKSADSANLNASRDEQAEKANQCVQAWKE 453


>U23172-4|AAL02494.1|  521|Caenorhabditis elegans Hypothetical
           protein F25B5.6b protein.
          Length = 521

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 726 DRRSHSRNINARRGDDATKSRQTTTLWRE 812
           D+ + S N+NA R + A K+ Q    W+E
Sbjct: 436 DKSADSANLNASRDEQAEKANQCVQAWKE 464


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -1

Query: 653  AQMSSAPATMHATPTYRTGSA*SSARPSQLISAPAHNNTM 534
            A  S  P+   +TPT  TGS  SS   S  IS    + TM
Sbjct: 1409 ASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTM 1448


>U41994-9|AAK31523.1|  786|Caenorhabditis elegans Hypothetical
           protein F59A6.3 protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -2

Query: 223 TVAGMKASASPRASTESDRHYNTAGGGSYSSGV*QRST*SVRQTAKRVADSG 68
           T +G   S +P AST S    +T  G S SSG    S  +V  T+     SG
Sbjct: 531 TTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSG 582


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,303,542
Number of Sequences: 27780
Number of extensions: 443196
Number of successful extensions: 1248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)