Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_M02
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synth...    23   3.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   5.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   5.1  

>AY343324-1|AAQ21381.1|  156|Apis mellifera vacuolar H+ ATP synthase
           16 kDa proteolipidsubunit protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 136 VAIGFEGSANKLGIGIVKDGEI 201
           +A+GF G A    IGIV D  +
Sbjct: 98  LAVGFSGLAAGFAIGIVGDAGV 119


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 630 NXSKPI*AVANSYVNSFTKY 571
           N  + + AV N Y N +TKY
Sbjct: 706 NAQQQVQAVRNYYANLYTKY 725


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 417 C*TMEKTYLRCKSLYWTYRNGKVDNQ 494
           C T+E+T  +C      Y NG+  +Q
Sbjct: 355 CNTLERTPSKCSQTSVHYSNGQTHSQ 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,723
Number of Sequences: 438
Number of extensions: 5777
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)