Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_L19
         (1045 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    30   6.0  
AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA...    30   6.0  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 4/60 (6%)
 Frame = +1

Query: 595 PXPPP--PXXLPXXWXAKPXTXXGEAXPXPXXXXPXXXPXASXPXLTLXT--XXPPPXLP 762
           P PPP  P   P      P T      P P    P   P    P +T+ T    PPP  P
Sbjct: 401 PTPPPTKPPTRPPTTYLPPPTVRTTRPPPPPTRPPTKPPTTYLPPVTVRTTRATPPPTRP 460


>AE014296-862|AAF47912.1|  707|Drosophila melanogaster CG13722-PA
           protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
 Frame = +1

Query: 595 PXPPPPXXLPXXWXAKPXTXXGEAXPXPXXXXPXXXPXASXPXLTLXTXXPPP----XLP 762
           P PPPP  LP     +       A P P    P   P    P +T     PPP     LP
Sbjct: 305 PPPPPPKYLPPPQVKQGYDYPKPAIPFP---PPTAPPQKYLPPVTTTKAPPPPPTVKYLP 361

Query: 763 XQEXXSGXXXXAXPXPXXP 819
             +   G        P  P
Sbjct: 362 PPQVKQGYDYPKPAVPFPP 380



 Score = 29.5 bits (63), Expect = 8.0
 Identities = 22/89 (24%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
 Frame = +1

Query: 550 LPXYSXIXSXLQYXXPXPP--PPXXLPXXWXAKPXTXXGEAXPXPXXXXPXXXPXASXPX 723
           +P    + S   Y  P  P  PP   P      P    G A P P    P        P 
Sbjct: 84  IPQEPKLVSGYSYPKPVVPFPPPTQPPQIRVTSPPVAEGYAYPTPSVPFPQPKQGYDYPK 143

Query: 724 LTLXTXXPPPXLPXQEXXSGXXXXAXPXP 810
             +    PPP +P Q+          P P
Sbjct: 144 PAV--PFPPPAVPTQKYLPPVTTTQAPPP 170


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,941,560
Number of Sequences: 53049
Number of extensions: 187269
Number of successful extensions: 460
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 5331226194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)