Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_L18
(929 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0203 + 1555471-1555523,1555743-1555863,1556340-1556651,155... 31 0.99
05_04_0309 - 20100231-20100307,20100362-20100503,20100588-201009... 31 1.3
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282... 30 2.3
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421... 30 2.3
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 30 3.0
09_04_0527 - 18337968-18338077,18338440-18341212 29 7.0
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 28 9.2
10_06_0004 - 9407954-9408007,9408219-9408386,9408441-9408542,940... 28 9.2
08_01_0253 + 2072766-2072954,2073526-2073591,2073755-2073877,207... 28 9.2
06_01_0667 + 4878784-4878900,4879016-4879118,4879256-4879341,487... 28 9.2
04_04_0861 + 28836544-28836609,28838191-28838264,28838551-288386... 28 9.2
03_01_0401 - 3108477-3108689,3108787-3108933,3109022-3109234,310... 28 9.2
>06_01_0203 +
1555471-1555523,1555743-1555863,1556340-1556651,
1556806-1556910,1557009-1557466,1557886-1558187,
1558300-1558481,1558893-1559083,1559248-1559381,
1559487-1559725
Length = 698
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -2
Query: 604 NWNVSSLFILRAPITASVSPLSALGSSYIVSNV*ERDLTVLLRYNASICFGFAFSATT 431
NWN S++ I A + +V P++A+ +YI + +R L ++ + + F+F T+
Sbjct: 540 NWNTSAVAIFLAILGLTVLPVNAVVGTYISNMFEDRQLLMVSQITLLVGIIFSFKITS 597
>05_04_0309 -
20100231-20100307,20100362-20100503,20100588-20100967,
20101049-20101076,20101182-20101306,20101402-20101457,
20101709-20101791,20101881-20101949,20102050-20102640
Length = 516
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 327 PVLELSPRVLRKRKSL--MPEKSKPSNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSL 500
P +E+ R+ R++ ++ P S R+ +P V E+A PK + L N +++
Sbjct: 419 PFVEMKSRLAREQVAVERKPAASHVDKSRLPAQPSAGVKLESAKPKIYDGLESNSRLEAA 478
Query: 501 SQTLETIYEE 530
+ L+ Y+E
Sbjct: 479 KRRLQERYQE 488
>10_08_0838 -
20927020-20927207,20927288-20927491,20927654-20928297,
20928549-20928788,20928884-20928978,20929087-20929434,
20929824-20930042,20930422-20930487,20931191-20931362,
20931456-20931703,20931933-20932073,20932238-20932330,
20932421-20932471,20933571-20933693,20933793-20934035,
20934131-20934211,20935245-20935340,20935535-20936320,
20936443-20937012,20937322-20937427,20938102-20938206,
20938311-20938432,20939321-20939413,20940081-20940104
Length = 1685
Score = 30.3 bits (65), Expect = 2.3
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Frame = +3
Query: 222 NMEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKS-LMPEKSKPS 398
N+E R+ C +M ++ + E K + L+ + VL+ L + ++ +
Sbjct: 148 NIEAKRLGCMYINEM---ELRKETEAKLSQEKEESESLKHATMVLQNDLDWLKYQLNEKA 204
Query: 399 NRRVNMKPRKHVVAENANPKQIEALYLNKTVK---SLSQTLETIYEEPKAESGDTEAVIG 569
NR ++ +KH++ + A YL +++K S Q+L+ Y + K E D
Sbjct: 205 NRLQDLNQQKHLLEHRISESDSVATYLEESMKVTESRVQSLKLEYSKMKRERDDAVKEAR 264
Query: 570 ARKIKRLLT 596
+ +I++ LT
Sbjct: 265 SMRIEKELT 273
>05_05_0034 -
21741148-21741275,21741890-21741928,21742007-21742121,
21742227-21742292,21743213-21743371,21743573-21743609,
21743757-21744194,21744735-21744817,21744920-21744956,
21745146-21745214,21745316-21745407,21745481-21745565,
21745903-21745982,21746327-21746724,21746813-21747717,
21747825-21747915,21748617-21750680,21750681-21750749,
21750850-21751273,21751644-21751763
Length = 1832
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 315 KINTPVLELSPRVLRKRKSLMPEKSKPSNRR-VNMKPRKHVVAENANPKQIE 467
K+ T + P+V+R+ + + S S + +N KP++ V +N NP +E
Sbjct: 353 KLKTRRRKHRPKVIREDRPAKKQMSTTSKEKPLNQKPKRKYVWKNRNPSSLE 404
>05_05_0030 -
21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 315 KINTPVLELSPRVLRKRKSLMPEKSKPSNRR-VNMKPRKHVVAENANPKQIE 467
K+ T + P+V+R+ + + + S + +N KP++ V +N NP +E
Sbjct: 358 KLKTRRRKHRPKVIREDRPAKKQMATTSEEKPLNQKPKRKYVRKNRNPSSLE 409
>09_04_0527 - 18337968-18338077,18338440-18341212
Length = 960
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/78 (20%), Positives = 41/78 (52%)
Frame = +3
Query: 279 IMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRRVNMKPRKHVVAENANPK 458
+ +DE+ T +IN ++ELS R+ R + ++ S P+ + + + ++ + +
Sbjct: 122 LFSLDEIATKADRINRQLMELSKRLGRWTQPILSGGSIPATKYDTEQQQLYLPGHDYSIT 181
Query: 459 QIEALYLNKTVKSLSQTL 512
E + ++K ++L ++L
Sbjct: 182 DAELVGIDKNRQTLIESL 199
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 291 DELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNRR 407
DE +T + NT S R R++K + EKSKP N+R
Sbjct: 963 DEAST---RCNTSNRTPSRRTSRRKKGVSAEKSKPKNKR 998
>10_06_0004 -
9407954-9408007,9408219-9408386,9408441-9408542,
9408710-9408934,9409889-9410047,9411768-9411900,
9412827-9413758,9413842-9413987,9415863-9416082
Length = 712
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 381 LALTTFFYAKLLVIIQEQVC*F*EHLCSARPLPL 280
L TT Y LV IQ+ +C +HL A+PL +
Sbjct: 657 LKFTTDMYLTCLVFIQDILCHLRKHLTFAKPLQI 690
>08_01_0253 +
2072766-2072954,2073526-2073591,2073755-2073877,
2073913-2074017,2074555-2074635,2074715-2074807,
2075023-2075098,2075182-2075261,2075359-2075430,
2075553-2075612,2075775-2075871,2076137-2076200,
2076303-2076362,2076539-2076608
Length = 411
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 468 PLFALGSHFRRQRVYEVSYSLGGLKVCFFLALTTFFYAKLLVIIQE 331
PL+A+G +F YEV ++GG +V + L +A L I E
Sbjct: 39 PLYAIGFNFLDFHYYEVFATVGGNRVTTYSCLKDGNFAILQAYIDE 84
>06_01_0667 +
4878784-4878900,4879016-4879118,4879256-4879341,
4879434-4879496,4879589-4879831,4880639-4880728,
4881403-4881600
Length = 299
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 481 LRYNASICFGFAFSATTCLRGFIF 410
L AS CFGFAF++ + G IF
Sbjct: 238 LNLAASFCFGFAFTSREAVTGSIF 261
>04_04_0861 +
28836544-28836609,28838191-28838264,28838551-28838671,
28838832-28839143,28839241-28839345,28839447-28839901,
28840116-28840417,28840589-28840767,28841256-28841446,
28841595-28841728,28841875-28842113
Length = 725
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 604 NWNVSSLFILRAPITASVSPLSALGSSYIVSNV*ERDLTV 485
NW+ S++ I A + +V P++A+ SYI + +R + V
Sbjct: 567 NWSTSAVAIFLAILGCTVLPVNAIVGSYITNLFEDRQILV 606
>03_01_0401 -
3108477-3108689,3108787-3108933,3109022-3109234,
3109321-3109938,3110045-3110584,3110941-3111041,
3111208-3111325,3111450-3111535,3111888-3112002
Length = 716
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +1
Query: 211 DAEKT---WNTREWSASYQLKWHI 273
D EKT W +W+ S LKWHI
Sbjct: 544 DFEKTLEYWQQDKWNGSLSLKWHI 567
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,574,998
Number of Sequences: 37544
Number of extensions: 366892
Number of successful extensions: 870
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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