Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_L18
(929 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069394-1|AAL39539.1| 299|Drosophila melanogaster LD10005p pro... 33 0.42
AF218585-1|AAF26736.1| 299|Drosophila melanogaster tantalus pro... 33 0.42
AE014296-1053|AAF50710.2| 299|Drosophila melanogaster CG6586-PA... 33 0.42
AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA... 31 3.0
D90310-1|BAA14340.1| 1505|Drosophila melanogaster DNA polymerase... 30 5.2
AB011813-1|BAA32745.1| 1415|Drosophila melanogaster DNA polymera... 30 5.2
AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpressio... 29 6.9
AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA... 29 6.9
AY455866-1|AAR19767.1| 583|Drosophila melanogaster putative cho... 29 9.1
AY102683-1|AAM27512.1| 545|Drosophila melanogaster LD23890p pro... 29 9.1
AE013599-3906|AAS64770.1| 545|Drosophila melanogaster CG3522-PB... 29 9.1
AE013599-3905|AAF47232.2| 583|Drosophila melanogaster CG3522-PA... 29 9.1
>AY069394-1|AAL39539.1| 299|Drosophila melanogaster LD10005p
protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.42
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 408 VNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT-LETIYEEPKAES 545
+ K RK + K IE +Y ++ +K + T LETI+EEP E+
Sbjct: 126 IKKKQRKELNTNAQTLKSIEKIYTSRRMKKFTPTNLETIFEEPSDEN 172
>AF218585-1|AAF26736.1| 299|Drosophila melanogaster tantalus
protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.42
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 408 VNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT-LETIYEEPKAES 545
+ K RK + K IE +Y ++ +K + T LETI+EEP E+
Sbjct: 126 IKKKQRKELNTNAQTLKSIEKIYTSRRMKKFTPTNLETIFEEPSDEN 172
>AE014296-1053|AAF50710.2| 299|Drosophila melanogaster CG6586-PA
protein.
Length = 299
Score = 33.5 bits (73), Expect = 0.42
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 408 VNMKPRKHVVAENANPKQIEALYLNKTVKSLSQT-LETIYEEPKAES 545
+ K RK + K IE +Y ++ +K + T LETI+EEP E+
Sbjct: 126 IKKKQRKELNTNAQTLKSIEKIYTSRRMKKFTPTNLETIFEEPSDEN 172
>AE014297-3026|AAF55908.2| 1488|Drosophila melanogaster CG6349-PA
protein.
Length = 1488
Score = 30.7 bits (66), Expect = 3.0
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 357 RKRKSLMPE-KSKP--SNRRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLETIYE 527
+K+K + P K +P + + V K + NA PK+++ K L+ L I E
Sbjct: 100 KKKKGVAPNSKKRPRENEKPVTGKASIKNLFSNAVPKKMDVKTSVKDDDILADILGEIKE 159
Query: 528 EPKAESGDTEAVIGARKI 581
EP A S E VI KI
Sbjct: 160 EPAATSEKAEKVIAPAKI 177
>D90310-1|BAA14340.1| 1505|Drosophila melanogaster DNA polymerase
alpha protein.
Length = 1505
Score = 29.9 bits (64), Expect = 5.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 357 RKRKSLMPE-KSKPSN--RRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLETIYE 527
+K+K + P K +P + V K + NA PK+++ K L+ L I E
Sbjct: 100 KKKKGVAPNSKKRPRENAKPVTGKASIKNLFSNAVPKKMDVKTSVKDDDILADILGEIKE 159
Query: 528 EPKAESGDTEAVIGARKI 581
EP A S E VI KI
Sbjct: 160 EPAATSEKAEKVIAPAKI 177
>AB011813-1|BAA32745.1| 1415|Drosophila melanogaster DNA polymerase
alpha 180K subunit protein.
Length = 1415
Score = 29.9 bits (64), Expect = 5.2
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 357 RKRKSLMPE-KSKPSN--RRVNMKPRKHVVAENANPKQIEALYLNKTVKSLSQTLETIYE 527
+K+K + P K +P + V K + NA PK+++ K L+ L I E
Sbjct: 100 KKKKGVAPNSKKRPRENAKPVTGKASIKNLFSNAVPKKMDVKTSVKDDDILADILGEIKE 159
Query: 528 EPKAESGDTEAVIGARKI 581
EP A S E VI KI
Sbjct: 160 EPAATSEKAEKVIAPAKI 177
>AF195494-1|AAG28466.1| 1106|Drosophila melanogaster Misexpression
suppressor of ras 4 protein.
Length = 1106
Score = 29.5 bits (63), Expect = 6.9
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 225 MEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNR 404
++ R + ++ TK IM L VP++ P L P+ +R+ + + P N
Sbjct: 867 LDIERTKADIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRRWSLTPPASPHNN 926
Query: 405 RVNM-KPRKHVVAE 443
VN+ +P ++ E
Sbjct: 927 HVNLPEPPPALITE 940
>AE013599-2504|AAF57837.2| 2171|Drosophila melanogaster CG4903-PA
protein.
Length = 2171
Score = 29.5 bits (63), Expect = 6.9
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 225 MEHSRVECELPTKMAHLDIMEVDELNTDVPKINTPVLELSPRVLRKRKSLMPEKSKPSNR 404
++ R + ++ TK IM L VP++ P L P+ +R+ + + P N
Sbjct: 868 LDIERTKADIITKKQSKIIMANAHLENVVPQVVDPPQHLQPQQEEQRRWSLTPPASPHNN 927
Query: 405 RVNM-KPRKHVVAE 443
VN+ +P ++ E
Sbjct: 928 HVNLPEPPPALITE 941
>AY455866-1|AAR19767.1| 583|Drosophila melanogaster putative
cholesterol transporter protein.
Length = 583
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 509 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 414
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
>AY102683-1|AAM27512.1| 545|Drosophila melanogaster LD23890p
protein.
Length = 545
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 509 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 414
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
>AE013599-3906|AAS64770.1| 545|Drosophila melanogaster CG3522-PB,
isoform B protein.
Length = 545
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 509 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 414
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
>AE013599-3905|AAF47232.2| 583|Drosophila melanogaster CG3522-PA,
isoform A protein.
Length = 583
Score = 29.1 bits (62), Expect = 9.1
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 509 CLRKRFNSFVEIQCLYLLWVRIFGDNVFTRFH 414
CL F+ V + L+L+ + I GDN+FT FH
Sbjct: 64 CLFVTFD-LVFVSLLWLICIVINGDNIFTAFH 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,727,020
Number of Sequences: 53049
Number of extensions: 675321
Number of successful extensions: 1910
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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