Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_L16
         (990 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q10L09 Cluster: Uncharacterised protein family containi...    28   1.6  
UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA...    27   2.3  
UniRef50_UPI00015B541C Cluster: PREDICTED: hypothetical protein;...    27   5.4  
UniRef50_Q54CQ8 Cluster: Putative uncharacterized protein; n=1; ...    34   6.5  
UniRef50_Q6FIZ5 Cluster: Similarity; n=1; Candida glabrata|Rep: ...    34   6.5  
UniRef50_Q9A2R2 Cluster: OmpA family protein; n=5; Caulobacter|R...    33   8.6  
UniRef50_Q8GD27 Cluster: Adhesin FhaB; n=3; cellular organisms|R...    33   8.6  
UniRef50_Q8H9E1 Cluster: Extensin; n=6; Eukaryota|Rep: Extensin ...    33   8.6  
UniRef50_Q17R98 Cluster: LOC152485 protein; n=42; Euteleostomi|R...    33   8.6  
UniRef50_P55316 Cluster: Forkhead box protein G1; n=29; root|Rep...    27   9.3  

>UniRef50_Q10L09 Cluster: Uncharacterised protein family containing
           protein, expressed; n=8; Oryza sativa|Rep:
           Uncharacterised protein family containing protein,
           expressed - Oryza sativa subsp. japonica (Rice)
          Length = 244

 Score = 28.3 bits (60), Expect(2) = 1.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 843 KKKXXXXGXXXPPPPPPP 896
           +KK    G   PPPPPPP
Sbjct: 39  RKKAGRRGEAKPPPPPPP 56



 Score = 26.6 bits (56), Expect(2) = 1.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 876 PPPPPPPP 899
           PPPPPPPP
Sbjct: 92  PPPPPPPP 99


>UniRef50_UPI0000E4896A Cluster: PREDICTED: similar to CG33556-PA;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to CG33556-PA - Strongylocentrotus purpuratus
          Length = 1472

 Score = 27.5 bits (58), Expect(2) = 2.3
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 834 PPXKKKXXXXGXXXPPPPPPP 896
           PP        G   PPPPPPP
Sbjct: 440 PPPPPPPLPGGSCIPPPPPPP 460



 Score = 26.6 bits (56), Expect(2) = 2.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 876 PPPPPPPP 899
           PPPPPPPP
Sbjct: 466 PPPPPPPP 473


>UniRef50_UPI00015B541C Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 661

 Score = 26.6 bits (56), Expect(2) = 5.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 875 PPPPPPPP 898
           PPPPPPPP
Sbjct: 527 PPPPPPPP 534



 Score = 26.2 bits (55), Expect(2) = 5.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 833 PPXKKKKXXXXXXXPPPPPPP 895
           PP +          PPPPPPP
Sbjct: 477 PPSRPPSSPSPPPPPPPPPPP 497


>UniRef50_Q54CQ8 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 910

 Score = 33.9 bits (74), Expect = 6.5
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -1

Query: 666 FXSPPPPXXKKXPPPPPXXXXXXKKXPPXG 577
           F  PPPP     PPPPP         PP G
Sbjct: 719 FAPPPPPMMSSGPPPPPGSSFGAPPPPPPG 748


>UniRef50_Q6FIZ5 Cluster: Similarity; n=1; Candida glabrata|Rep:
            Similarity - Candida glabrata (Yeast) (Torulopsis
            glabrata)
          Length = 1665

 Score = 33.9 bits (74), Expect = 6.5
 Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -1

Query: 657  PPPPXX--KKXPPPPPXXXXXXKKXPP 583
            PPPP    KK PPPPP      KK PP
Sbjct: 1116 PPPPHGQLKKKPPPPPPQGQLKKKPPP 1142


>UniRef50_Q9A2R2 Cluster: OmpA family protein; n=5; Caulobacter|Rep:
           OmpA family protein - Caulobacter crescentus
           (Caulobacter vibrioides)
          Length = 449

 Score = 33.5 bits (73), Expect = 8.6
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 672 FFFXSPPPPXXKKXPPPPPXXXXXXKKXPP 583
           + F SPPPP     PPPPP         PP
Sbjct: 301 YSFASPPPPPPPPPPPPPPPPPPPPPPPPP 330


>UniRef50_Q8GD27 Cluster: Adhesin FhaB; n=3; cellular organisms|Rep:
            Adhesin FhaB - Bordetella avium
          Length = 2621

 Score = 33.5 bits (73), Expect = 8.6
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +1

Query: 808  KKKKXXXXXPPXKKKXXXXXXXPPPPPPPP 897
            K KK     PP   K       PPPPPPPP
Sbjct: 2336 KVKKVDPPPPPPPPKVKKVDPPPPPPPPPP 2365


>UniRef50_Q8H9E1 Cluster: Extensin; n=6; Eukaryota|Rep: Extensin -
           Solanum tuberosum (Potato)
          Length = 152

 Score = 33.5 bits (73), Expect = 8.6
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -1

Query: 666 FXSPPPPXXKKXPPPPPXXXXXXKKXPP 583
           + SPPPP  K   PPPP      K  PP
Sbjct: 85  YKSPPPPVYKYKSPPPPPPVYKYKSPPP 112


>UniRef50_Q17R98 Cluster: LOC152485 protein; n=42; Euteleostomi|Rep:
           LOC152485 protein - Homo sapiens (Human)
          Length = 1081

 Score = 33.5 bits (73), Expect = 8.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +2

Query: 833 PPXKKKKXXXXXXXPPPPPPPP 898
           PP  +KK       PPPPPPPP
Sbjct: 317 PPPSEKKPEKVTPPPPPPPPPP 338


>UniRef50_P55316 Cluster: Forkhead box protein G1; n=29; root|Rep:
           Forkhead box protein G1 - Homo sapiens (Human)
          Length = 489

 Score = 26.6 bits (56), Expect(2) = 9.3
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 875 PPPPPPPP 898
           PPPPPPPP
Sbjct: 105 PPPPPPPP 112



 Score = 25.4 bits (53), Expect(2) = 9.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 833 PPXKKKKXXXXXXXPPPPPPP 895
           PP  +         PPPPPPP
Sbjct: 60  PPAPQPPPPPQQQQPPPPPPP 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,563,149
Number of Sequences: 1657284
Number of extensions: 10624220
Number of successful extensions: 344253
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 27755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120260
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 93081302556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)