Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_L16
(990 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 32 0.73
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.9
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 3.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 25 3.6
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 25 3.6
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.9
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 29 3.9
AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical ... 25 4.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 25 4.9
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 29 5.1
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 5.1
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 5.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.1
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 24 5.9
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 6.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.8
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.8
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 6.8
AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical ... 29 6.8
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.9
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.9
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 31.9 bits (69), Expect = 0.73
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPP 583
PPPP ++ PPPPP PP
Sbjct: 21 PPPPSPRRAPPPPPHRKPASLSPPP 45
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -1
Query: 669 FFXSPPPPXXKKXPPPPPXXXXXXKKXPP 583
F PPPP + PPPP PP
Sbjct: 16 FRKQPPPPPSPRRAPPPPPHRKPASLSPP 44
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPPXG 577
PPPP PPPPP PP G
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPP 583
PPPP PPPPP PP
Sbjct: 106 PPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPP 583
PPPP PPPPP PP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPP 99
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPP 583
PPPP PPPPP K PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPP 583
PPPP PPPPP K PP
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 657 PPPPXXKKXPPPPPXXXXXXKKXPP 583
PPPP PPPPP K PP
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPP 368
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPPP 899
PP G PPPPPPPP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPPP 899
PP G PPPPPPPP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPPP 482
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPPP 899
PP G PPPPPPPP
Sbjct: 235 PPPPLPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPPP 899
PP G PPPPPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPPP 899
PP G PPPPPPPP
Sbjct: 221 PPPPLPPVGAGAPPPPPPPPPP 242
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 26.6 bits (56), Expect(2) = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 876 PPPPPPPP 899
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 21.4 bits (43), Expect(2) = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 864 GXXXPPPPPPP 896
G P PPPPP
Sbjct: 268 GQYPPVPPPPP 278
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 26.6 bits (56), Expect(2) = 3.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 876 PPPPPPPP 899
PPPPPPPP
Sbjct: 297 PPPPPPPP 304
Score = 21.4 bits (43), Expect(2) = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 864 GXXXPPPPPPP 896
G P PPPPP
Sbjct: 258 GQYPPVPPPPP 268
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 838 PXKKKXXXXXXXPPPPPPP 894
P ++ PPPPPPP
Sbjct: 236 PTTRRLPPPTTPPPPPPPP 254
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 874 PPPPPPPP 897
PPPPPP P
Sbjct: 249 PPPPPPAP 256
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 838 PXKKKXXXXXXXPPPPPPP 894
P ++ PPPPPPP
Sbjct: 234 PTTRRLPPPTTPPPPPPPP 252
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 874 PPPPPPPP 897
PPPPPP P
Sbjct: 247 PPPPPPAP 254
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 657 PPPPXXKKXPPPPP 616
PPPP K PPPPP
Sbjct: 89 PPPPPTLKAPPPPP 102
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 898 GGGGGGGGXXXPXXXFFFFXGG 833
GGG GGGG P F F GG
Sbjct: 81 GGGAGGGGGGFPGGLFSHFFGG 102
>AF067622-1|AAC17543.2| 366|Caenorhabditis elegans Hypothetical
protein F33E11.2 protein.
Length = 366
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 864 GXXXPPPPPPP 896
G PPPPPPP
Sbjct: 236 GILAPPPPPPP 246
Score = 22.6 bits (46), Expect(2) = 4.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 876 PPPPPPPP 899
PPPPPP P
Sbjct: 241 PPPPPPLP 248
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 25.0 bits (52), Expect(2) = 4.9
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPP 896
PP + PPPPPPP
Sbjct: 58 PPCPAQFCPPPPICPPPPPPP 78
Score = 22.6 bits (46), Expect(2) = 4.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 876 PPPPPPPP 899
P PPPPPP
Sbjct: 80 PCPPPPPP 87
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 812 KKXXXXXPPXKKKKXXXXXXXPPPPPPPP 898
KK P K + PPPPPPPP
Sbjct: 244 KKLGSRHPRSLKSQRFEPSQPPPPPPPPP 272
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 657 PPPPXXKKXPPPPP 616
PPPP ++ PPPPP
Sbjct: 298 PPPPIKEESPPPPP 311
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.1 bits (62), Expect = 5.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1
Query: 657 PPPPXXKKXPPPPP 616
PPPP ++ PPPPP
Sbjct: 298 PPPPIKEESPPPPP 311
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 660 SPPPPXXKKXPPPPP 616
SPPPP PPPPP
Sbjct: 288 SPPPPRAGSPPPPPP 302
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 656 PPPXXKKKXPPPPPRXXXXXKKXPP 582
PPP PPPPPR PP
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPP 314
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 660 SPPPPXXKKXPPPPPXXXXXXKKXPPXG 577
SPPP PPPP ++ PP G
Sbjct: 320 SPPPAGTGSPPPPPRQKRQAPERSPPTG 347
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 660 SPPPPXXKKXPPPPP 616
SPPPP PPPPP
Sbjct: 309 SPPPPRAGSPPPPPP 323
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 656 PPPXXKKKXPPPPPRXXXXXKKXPP 582
PPP PPPPPR PP
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPP 335
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 660 SPPPPXXKKXPPPPPXXXXXXKKXPPXG 577
SPPP PPPP ++ PP G
Sbjct: 341 SPPPAGTGSPPPPPRQKRQAPERSPPTG 368
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 660 SPPPPXXKKXPPPPP 616
SPPPP PPPPP
Sbjct: 294 SPPPPRAGSPPPPPP 308
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 656 PPPXXKKKXPPPPPRXXXXXKKXPP 582
PPP PPPPPR PP
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPP 320
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 660 SPPPPXXKKXPPPPPXXXXXXKKXPPXG 577
SPPP PPPP ++ PP G
Sbjct: 326 SPPPAGTGSPPPPPRQKRQAPERSPPTG 353
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +1
Query: 835 PPXKKKXXXXXXXPPPPPPP 894
PP PPPPPPP
Sbjct: 154 PPTPIPTPVPILEPPPPPPP 173
Score = 23.0 bits (47), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 874 PPPPPPPP 897
PPPPP PP
Sbjct: 169 PPPPPVPP 176
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 898 GGGGGGGGXXXPXXXFFFFXGG 833
GGGGGG G P F F GG
Sbjct: 74 GGGGGGEGFHNPFDVFDMFFGG 95
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 669 FFXSPPPPXXKKXPPPPP 616
+ +PPPP PPPPP
Sbjct: 130 YIEAPPPPPSPPPPPPPP 147
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 834 PPXKKKXXXXGXXXPPPPPPP 896
PP + G PPPPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPP 144
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 657 PPPPXXKKXPPPPP 616
PPPP + PPPPP
Sbjct: 784 PPPPRASEPPPPPP 797
>AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical
protein Y48A6B.13 protein.
Length = 396
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 660 SPPPPXXKKXPPPP 619
SPPPP K PPPP
Sbjct: 313 SPPPPTQKAPPPPP 326
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 109 FNFXN-FXEXIPVKFPGAXGLKGGFP 183
F+F F +P FPGA G+ GGFP
Sbjct: 280 FDFEGGFPGGMPGGFPGAGGMPGGFP 305
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 833 PPXKKKKXXXXXXXPPPPPPPP 898
PP PPPPPPPP
Sbjct: 520 PPSSSGSGSNRRSGPPPPPPPP 541
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 109 FNFXN-FXEXIPVKFPGAXGLKGGFP 183
F+F F +P FPGA G+ GGFP
Sbjct: 280 FDFEGGFPGGMPGGFPGAGGMPGGFP 305
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 667 FXFXPPPXXKKXPPPPP 617
F F PPP PPPPP
Sbjct: 293 FGFFPPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 667 FXFXPPPXXKKXPPPPP 617
F F PPP PPPPP
Sbjct: 293 FGFFPPPPRGHFPPPPP 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,668,454
Number of Sequences: 27780
Number of extensions: 279971
Number of successful extensions: 9948
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3344
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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