Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_L14
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0838 + 11641484-11642030,11643614-11643650,11643784-116438...    29   4.1  
01_03_0136 - 12897284-12897399,12897679-12897727,12898563-128986...    29   4.1  
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173...    29   5.4  
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135     29   5.4  
03_05_0243 - 22275425-22276402,22277192-22277307,22277434-22279012     29   5.4  
01_05_0645 - 23899579-23904483                                         29   5.4  
01_01_1116 + 8839946-8840048,8840142-8842064,8842192-8842307,884...    29   5.4  
12_01_0022 + 165056-165408,165477-165624,166248-166248,166305-16...    29   7.2  

>03_02_0838 +
           11641484-11642030,11643614-11643650,11643784-11643841,
           11646176-11646265,11646796-11646913,11648093-11648277,
           11648330-11648455,11648578-11648634,11648741-11648821,
           11649068-11649102,11649265-11649354,11649443-11649599,
           11649785-11649901
          Length = 565

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +3

Query: 150 AEMEN--DVSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQAS 323
           AE EN  DV+P + E+    E   N  VVQ       +    + ++++ E  LP+ ++ S
Sbjct: 329 AEQENSADVAPPQPEEASNTE---NHPVVQDVMGEGMLRIAATRDWVSGESSLPVSKRLS 385

Query: 324 NNDREVQNETIKE 362
             DR+ + E  KE
Sbjct: 386 AKDRQDERERRKE 398


>01_03_0136 -
           12897284-12897399,12897679-12897727,12898563-12898661,
           12898781-12898886,12899209-12899304,12899394-12899542,
           12899629-12899904,12900229-12900317,12900921-12901013,
           12901110-12901205,12901337-12901444,12901703-12901895,
           12902608-12902639,12902997-12903066
          Length = 523

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 277 LDDFLSKIFEPQNLHCTTSLFFPSSTYSLCSVSIGD 170
           ++D+++K+   ++LH  TS       +S+CS SI D
Sbjct: 339 IEDYMNKMDVQKSLHANTSGLIKDRKWSICSYSIFD 374


>09_06_0001 +
           20114108-20115686,20115813-20115928,20116416-20117394,
           20118820-20119082
          Length = 978

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 271 DFLSKIFEPQNLHCTTSLFFPSSTYS 194
           D ++KIF+P  L  TT  ++P  TY+
Sbjct: 392 DMVNKIFKPSTLTSTTRNYYPRPTYA 417


>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
          Length = 1275

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 271 DFLSKIFEPQNLHCTTSLFFPSSTYS 194
           D ++KIF+P  L  TT  ++P  TY+
Sbjct: 472 DMVNKIFKPSTLTSTTRNYYPRPTYA 497


>03_05_0243 - 22275425-22276402,22277192-22277307,22277434-22279012
          Length = 890

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 271 DFLSKIFEPQNLHCTTSLFFPSSTYS 194
           D ++KIF+P  L  TT  ++P  TY+
Sbjct: 392 DMVNKIFKPSTLTSTTRNYYPRPTYA 417


>01_05_0645 - 23899579-23904483
          Length = 1634

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 271 DFLSKIFEPQNLHCTTSLFFPSSTYS 194
           D ++KIF+P  L  TT  ++P  TY+
Sbjct: 392 DIVNKIFKPSTLTSTTRNYYPRPTYA 417


>01_01_1116 +
           8839946-8840048,8840142-8842064,8842192-8842307,
           8843340-8843763,8845187-8845452
          Length = 943

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 271 DFLSKIFEPQNLHCTTSLFFPSSTYS 194
           D ++KIF+P  L  TT  ++P  TY+
Sbjct: 541 DMVNKIFKPSTLTSTTRNYYPRPTYA 566


>12_01_0022 +
           165056-165408,165477-165624,166248-166248,166305-166602,
           166819-167387,167554-168377
          Length = 730

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 303 PLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCD 455
           P++     N ++ Q E + E  + EN  T   IG     +NH+  S   CD
Sbjct: 462 PMVVTQQKNHKKTQAEEVDEKKNQENPNTDATIGAPSGGENHQNRSLISCD 512


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,763,021
Number of Sequences: 37544
Number of extensions: 339915
Number of successful extensions: 640
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)