Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_L14
(951 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U74324-1|AAB18264.1| 123|Homo sapiens guanine nucleotide exchan... 89 2e-17
BT007133-1|AAP35797.1| 123|Homo sapiens RAB interacting factor ... 89 2e-17
BC037392-1|AAH37392.1| 123|Homo sapiens RAB interacting factor ... 89 2e-17
BC018488-1|AAH18488.1| 123|Homo sapiens RAB interacting factor ... 89 2e-17
S78873-1|AAB34955.1| 123|Homo sapiens Mss4 protein. 88 4e-17
AK223538-1|BAD97258.1| 123|Homo sapiens RAB-interacting factor ... 88 5e-17
BC052259-1|AAH52259.1| 508|Homo sapiens OSBPL6 protein protein. 31 8.1
AK093902-1|BAC04248.1| 938|Homo sapiens protein ( Homo sapiens ... 31 8.1
AK027600-1|BAB55223.1| 719|Homo sapiens protein ( Homo sapiens ... 31 8.1
AF462443-1|AAP97711.1| 898|Homo sapiens OSBP-related protein 6 ... 31 8.1
AF392448-1|AAL40661.1| 934|Homo sapiens oxysterol-binding prote... 31 8.1
AF323728-1|AAG53409.1| 934|Homo sapiens OSBP-related protein 6 ... 31 8.1
AC011743-1|AAY15090.1| 861|Homo sapiens unknown protein. 31 8.1
AB208898-1|BAD92135.1| 966|Homo sapiens oxysterol-binding prote... 31 8.1
>U74324-1|AAB18264.1| 123|Homo sapiens guanine nucleotide exchange
factor mss4 protein.
Length = 123
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 168 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 341
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 342 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 518
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 519 VH 524
H
Sbjct: 121 SH 122
>BT007133-1|AAP35797.1| 123|Homo sapiens RAB interacting factor
protein.
Length = 123
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 168 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 341
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 342 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 518
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 519 VH 524
H
Sbjct: 121 SH 122
>BC037392-1|AAH37392.1| 123|Homo sapiens RAB interacting factor
protein.
Length = 123
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 168 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 341
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 342 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 518
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 519 VH 524
H
Sbjct: 121 SH 122
>BC018488-1|AAH18488.1| 123|Homo sapiens RAB interacting factor
protein.
Length = 123
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/122 (34%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Frame = +3
Query: 168 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 341
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 342 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 518
+ ++E + VE+M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERV 120
Query: 519 VH 524
H
Sbjct: 121 SH 122
>S78873-1|AAB34955.1| 123|Homo sapiens Mss4 protein.
Length = 123
Score = 88.2 bits (209), Expect = 4e-17
Identities = 40/109 (36%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 207 DGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREVQNETIKEFYHVEN 380
+G+N+ V C+ CGS++L ++ + ++ LP M++ A ++ + ++E + VE+
Sbjct: 14 EGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNPDGDLLQEHWLVED 73
Query: 381 MYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRIVH 524
M+ FEN+GFT V N K+L CADC+ GP+G+H + ++S YVA+ R+ H
Sbjct: 74 MFIFENVGFTKDVGNIKFLVCADCEIGPIGWHCLDDKNSFYVALERVSH 122
>AK223538-1|BAD97258.1| 123|Homo sapiens RAB-interacting factor
variant protein.
Length = 123
Score = 87.8 bits (208), Expect = 5e-17
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Frame = +3
Query: 168 VSPIETEQREYVEDGKNKLVVQCKFCGSKILDKKSSNYIAQEKDLPLMQQ--ASNNDREV 341
+ P E +G+N+ V C+ CGS++L ++ + ++ LP M++ A ++
Sbjct: 1 MEPAEQPSELVSAEGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPALSDGSNP 60
Query: 342 QNETIKEFYHVENMYTFENIGFTHTVDNHKYLSCADCDAGPVGYHDTNTRHS-YVAISRI 518
+ ++E + VE+M+ FEN+GFT V N K+L C DC+ GP+G+H + ++S YVA+ R+
Sbjct: 61 DGDLLQEHWLVEDMFIFENVGFTKDVGNIKFLVCTDCEIGPIGWHCLDDKNSFYVALERV 120
Query: 519 VH 524
H
Sbjct: 121 SH 122
>BC052259-1|AAH52259.1| 508|Homo sapiens OSBPL6 protein protein.
Length = 508
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 407 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 453
>AK093902-1|BAC04248.1| 938|Homo sapiens protein ( Homo sapiens
cDNA FLJ36583 fis, clone TRACH2013123, moderately
similar to Homo sapiens oxysterol binding
protein-related protein ).
Length = 938
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 478 LPLSQQVANESRLPMSESVSEFFDAQEVLLSASSSENEASDDESYIS 524
>AK027600-1|BAB55223.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ14694 fis, clone NT2RP2005407, weakly similar to
OXYSTEROL-BINDING PROTEIN. ).
Length = 719
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 259 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 305
>AF462443-1|AAP97711.1| 898|Homo sapiens OSBP-related protein 6
isoform protein.
Length = 898
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 438 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 484
>AF392448-1|AAL40661.1| 934|Homo sapiens oxysterol-binding
protein-like protein OSBPL6 protein.
Length = 934
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 474 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 520
>AF323728-1|AAG53409.1| 934|Homo sapiens OSBP-related protein 6
protein.
Length = 934
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 474 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 520
>AC011743-1|AAY15090.1| 861|Homo sapiens unknown protein.
Length = 861
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 478 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 524
>AB208898-1|BAD92135.1| 966|Homo sapiens oxysterol-binding
protein-like protein 6 isoform a variant protein.
Length = 966
Score = 30.7 bits (66), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 300 LPLMQQASNNDREVQNETIKEFYHVENMYTFENIGFTHTVDNHKYLS 440
LPL QQ +N R +E++ EF+ + + + D+ Y+S
Sbjct: 506 LPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYIS 552
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,276,588
Number of Sequences: 237096
Number of extensions: 2022790
Number of successful extensions: 7691
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7685
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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