Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_L13
         (1053 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248...    29   8.2  

>05_04_0173 +
           18724367-18724476,18724570-18724651,18724750-18724840,
           18725060-18725172,18725270-18725342,18725445-18725565,
           18725665-18725782,18726609-18726748,18726824-18726881,
           18727007-18727077,18727181-18727733
          Length = 509

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 638 GGGPXPXFXGXXMVXWGXPRGGCXRG 715
           G GP P + G  M   G PRGG   G
Sbjct: 443 GRGPPPPYPGSGMAGTGGPRGGVGGG 468


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,820,052
Number of Sequences: 37544
Number of extensions: 240418
Number of successful extensions: 364
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3117811332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)