Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_L08
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    32   0.66 
U28943-15|AAA68366.1|  112|Caenorhabditis elegans Hypothetical p...    29   3.5  
U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical pr...    29   6.1  
AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-li...    29   6.1  
U00063-4|AAK18962.1|  237|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 604 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 726
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>U28943-15|AAA68366.1|  112|Caenorhabditis elegans Hypothetical
           protein E04F6.12 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = -2

Query: 812 SGRAERGVRAHSPSLERTTLHRTEIPTA*AMRKRHASRREKGGQV 678
           +G A+RGV+   P      L    + TA   R R  SRREKG QV
Sbjct: 21  AGGAQRGVKEQKPRPVFVLLFGDAVETA--ERVREKSRREKGQQV 63


>U28941-5|AAM98026.2|  989|Caenorhabditis elegans Hypothetical
           protein F31D5.4 protein.
          Length = 989

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 654 VPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*GRSLQAGAVCTNPPFSPTAAPYPVT- 830
           V T+P T   S    + S   +  S   + ++V   S  A +  T+P  SPT  P P T 
Sbjct: 279 VTTVPTTTATSTSTSTASTTTTTPSTSTHTTTV-TYSTNATSSTTSPTTSPTPEPEPTTT 337

Query: 831 -IVLSPT 848
             VL+PT
Sbjct: 338 ATVLAPT 344


>AY314775-1|AAQ84882.1|  971|Caenorhabditis elegans methuselah-like
           protein MTH-2 protein.
          Length = 971

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +3

Query: 654 VPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV*GRSLQAGAVCTNPPFSPTAAPYPVT- 830
           V T+P T   S    + S   +  S   + ++V   S  A +  T+P  SPT  P P T 
Sbjct: 261 VTTVPTTTATSTSTSTASTTTTTPSTSTHTTTV-TYSTNATSSTTSPTTSPTPEPEPTTT 319

Query: 831 -IVLSPT 848
             VL+PT
Sbjct: 320 ATVLAPT 326


>U00063-4|AAK18962.1|  237|Caenorhabditis elegans Hypothetical
           protein F56C9.7 protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +3

Query: 663 LPLTGYLSAFLPS-GSVALSHSSRCRYLSSV*GRSLQAGAVCTNPPFSPTAAPYPVTIVL 839
           L +TG  +  LP+ G   L+     +Y S V G S  A   C + PF+   A +  ++ L
Sbjct: 13  LLVTGLFNPLLPTLGDYLLTDQQVQKYFS-VAGPSNLAIGTCNSVPFASAQAGFASSVGL 71

Query: 840 SPT 848
           +PT
Sbjct: 72  APT 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,193,270
Number of Sequences: 27780
Number of extensions: 438493
Number of successful extensions: 1146
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)