Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_L03
         (1082 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         29   4.8  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   4.8  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           29   6.4  
11_06_0610 - 25449085-25453284                                         29   8.5  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/47 (29%), Positives = 14/47 (29%)
 Frame = +1

Query: 220 PXPXXXPKPPNGXXXPPXXXSXXXPAXXXPXPXXQVXXXPXQXTPPP 360
           P P   P PP     PP       P    P P       P    PPP
Sbjct: 148 PPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPP 194


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 17/57 (29%), Positives = 19/57 (33%)
 Frame = +1

Query: 211 AGXPXPXXXPKPPNGXXXPPXXXSXXXPAXXXPXPXXQVXXXPXQXTPPPHXXXXPD 381
           A  P P   P PP+G    P       P    P P  Q      Q  PPP     P+
Sbjct: 542 AAPPPPPPPPPPPSGNK--PAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPN 596


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +3

Query: 753 PXSPPXGGPXFGRXXXXXXPPVPPXXAAXDGXXGXPP 863
           P  PP   P   R       P PP  AA  G  G PP
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPP 386


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/47 (29%), Positives = 14/47 (29%)
 Frame = +1

Query: 220  PXPXXXPKPPNGXXXPPXXXSXXXPAXXXPXPXXQVXXXPXQXTPPP 360
            P P   P PP     PP       P    P P   V   P     PP
Sbjct: 1139 PVPVSSPPPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPP 1185



 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +1

Query: 220  PXPXXXPKPPNGXXXPP-XXXSXXXPAXXXPXPXXQVXXXPXQXTPPP 360
            P P   P PP     PP    S   P    P P   +   P   +PPP
Sbjct: 1155 PAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPP 1202



 Score = 28.7 bits (61), Expect = 8.5
 Identities = 15/48 (31%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +1

Query: 220  PXPXXXPKPPNGXXXPP-XXXSXXXPAXXXPXPXXQVXXXPXQXTPPP 360
            P P   P PP     PP    S   P    P P   +   P   +PPP
Sbjct: 1187 PAPVILPPPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPP 1234


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.141    0.474 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,603,546
Number of Sequences: 37544
Number of extensions: 192891
Number of successful extensions: 564
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3234583292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)