Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K24
(947 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0421 + 8306363-8306417,8307266-8307413,8308192-8308267 33 0.44
12_01_0809 + 7422137-7422251,7425578-7426353 32 0.58
04_04_0870 + 28895594-28895870,28896017-28896354 32 0.77
02_05_0307 + 27746466-27746544,27746648-27746920,27747034-27747311 31 1.0
10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697 31 1.3
02_02_0489 + 10869482-10871218 30 3.1
03_05_0505 + 24991699-24991921,24992100-24992665 29 4.1
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 29 4.1
12_02_0359 + 17956816-17956915,17957255-17957347,17957583-179578... 29 5.4
11_06_0386 + 23012139-23012530,23012773-23012955,23013094-230131... 29 7.1
08_01_0213 - 1703682-1703696,1703824-1703919,1704033-1704104,170... 29 7.1
07_03_1697 - 28795521-28797328,28797430-28797550 29 7.1
07_03_0309 + 16569201-16569468,16570310-16570534,16570860-16571176 29 7.1
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 29 7.1
02_05_1327 - 35718908-35719270,35719537-35719953,35720183-35720557 29 7.1
01_01_1125 - 8920590-8924372 29 7.1
06_01_0122 + 944353-944451,944547-945080 28 9.4
03_05_0654 + 26479416-26479605,26480058-26480246,26480674-264809... 28 9.4
02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421 28 9.4
>03_02_0421 + 8306363-8306417,8307266-8307413,8308192-8308267
Length = 92
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 242 HVKKQEEEKLRAQVQKEIASRCRSCAYKGYECLQPVLSGRQYCYRHVLRDPTAPYRQCVH 421
HVKK+ EE LR++++++ C K EC + GR + R C+H
Sbjct: 11 HVKKKVEEALRSKMKQKALKECDFYCSKYAECAR----GRTFSVVWQCRKQAKELNDCLH 66
Query: 422 NYAN 433
+ N
Sbjct: 67 QFTN 70
>12_01_0809 + 7422137-7422251,7425578-7426353
Length = 296
Score = 32.3 bits (70), Expect = 0.58
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -1
Query: 494 TTQGPGDH*CPWVPATYTSPRWHSCARTACRGRSGRGAH 378
T +GPGDH P A++++P S A T RSG G H
Sbjct: 178 TGRGPGDHASPSTSASFSAPSSSSAATT---DRSGSGEH 213
>04_04_0870 + 28895594-28895870,28896017-28896354
Length = 204
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 272 RAQVQKEIASRCRSCAYKGYECLQPVLSGRQYCYRHVLR 388
R+ ++ E RCR K + C + V+ G +YC RHV R
Sbjct: 104 RSSMEPE-PGRCRRTDGKKWRCSRDVVPGHKYCERHVHR 141
>02_05_0307 + 27746466-27746544,27746648-27746920,27747034-27747311
Length = 209
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 302 RCRSCAYKGYECLQPVLSGRQYCYRHVLR 388
RCR K + C + V+ G +YC RHV R
Sbjct: 138 RCRRTDGKKWRCSRDVVPGHKYCERHVHR 166
>10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697
Length = 375
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 297 PRGVARARTRATNACSPCCLVGSTATDMCSATRPPPTGSA-CTTM-PTGRGV 446
P A A A+ C PC + + S PPP A CT + P+G GV
Sbjct: 11 PPPPAAAAAEASWECDPCACAATAGSPCGSCGAPPPWACARCTLLNPSGSGV 62
>02_02_0489 + 10869482-10871218
Length = 578
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 176 GGPTKSGIRITNVRTIKPPDPEHVKKQEEEKLRAQVQKEIAS 301
GG + G + + P+PE VKK+ +K +A+ +K+ A+
Sbjct: 85 GGGDEEGEEVEGDSSESEPEPEPVKKESAKKAKAEAKKKRAA 126
>03_05_0505 + 24991699-24991921,24992100-24992665
Length = 262
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 309 ARARTRATNACSPCCLVGSTATDMCSATRPPPTGSACTTMPTGRG 443
A A + A C +T C+ RPP T AC + G G
Sbjct: 34 AHATSHMHKAGMHACASSTTVARCCAGPRPPATAHACALLRHGGG 78
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 466 VHGCRQRTPLPVGIVVHALPVGGGRVAEHMSVAVLPTRQHGLQAFVALVRAR 311
VH R R+ P+GI +H +G AE S A +P + ++ F +L R R
Sbjct: 155 VHLGRVRSVSPLGITLHTCSIGPH--AEEFSCAEVPVMKIRVRPFASLRRGR 204
>12_02_0359 +
17956816-17956915,17957255-17957347,17957583-17957813,
17958433-17958736,17959505-17960156
Length = 459
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +2
Query: 302 RCRSCAYKGYECLQPVLSGRQYCYRHVLRDPTAPYRQCVHNYANGERCTLPA 457
RCR K + C + + ++YC RH+ R + ++ + T+PA
Sbjct: 161 RCRRTDGKKWRCSRDAVVDQKYCERHINRGRHRSRKHVEGQSSHAAKATVPA 212
>11_06_0386 +
23012139-23012530,23012773-23012955,23013094-23013151,
23013828-23013872
Length = 225
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 413 TACRGRSGRGAHV-CSSTADQTARAASIRSPCTRTSDTARR 294
+ACR R RG C+ +ARA RSP + S RR
Sbjct: 53 SACRRRHRRGGRRGCAKNGAGSARACGARSPTSSASSGQRR 93
>08_01_0213 -
1703682-1703696,1703824-1703919,1704033-1704104,
1704372-1704444,1704508-1704710,1705058-1706330,
1706800-1706868,1706940-1707088,1707275-1707487,
1708385-1708669
Length = 815
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 464 PWVPATYTSPRWHSCARTACRGRSGRGAH 378
PW +PRW C G SGR AH
Sbjct: 10 PWTSPRGAAPRWSPCTPAGADG-SGRAAH 37
>07_03_1697 - 28795521-28797328,28797430-28797550
Length = 642
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +3
Query: 297 PRGVARARTRATNACSPCCLVGSTATDMCSATRPPPTG-SACTTMPTGRGVRCRHPWTLM 473
PRG+ R R A PCC PP G ACT+ RG C P T
Sbjct: 338 PRGLPSRRYRRCRADHPCCHDARHGPSCHHGCCPPHHGKQACTSC---RGQHCCRPRTQE 394
Query: 474 IP 479
P
Sbjct: 395 SP 396
>07_03_0309 + 16569201-16569468,16570310-16570534,16570860-16571176
Length = 269
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 302 RCRSCAYKGYECLQPVLSGRQYCYRHVLRDPTAPYRQCVHN 424
RCR K + C + ++ +YC RH+ R P + V +
Sbjct: 185 RCRRTDGKKWRCWRNAIANEKYCERHMHRGRKRPVQLVVED 225
>03_02_0067 +
5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 28.7 bits (61), Expect = 7.1
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 303 GVARARTRATNACSPCCLVGSTATDMCSATRPPPTGSACTTMPTGRGVRCRHPWTLMIPG 482
GVA + ++ S CL S A + S T ++ +MP G+ RC TL + G
Sbjct: 598 GVAASSFSVSSLSSDKCLE-SLAALLSSQTLRDAIRTSINSMPEGQSSRCIEELTLDLTG 656
Query: 483 TL 488
TL
Sbjct: 657 TL 658
>02_05_1327 - 35718908-35719270,35719537-35719953,35720183-35720557
Length = 384
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +3
Query: 369 ATDMCSATRPPPTG----SACTTMPTGRGVRCRHPWTLMIPGTLG 491
A D+ +AT PP + GVR +PW L +PGT+G
Sbjct: 154 AFDLPTATAPPVVRYVWPETFSEELNAMGVRAGNPWQLGLPGTMG 198
>01_01_1125 - 8920590-8924372
Length = 1260
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 295 RLAVSLVRVQGLRMLAARAVWSAVLLQTCAPRPD--RPLQAVRAQLCQRGEVYVAGTH 462
R A + + + G +AR +W A+L + CA R D R L+ + A + + G V+ T+
Sbjct: 248 RDAAARLALAGPATSSARRLWDALLRRACAVRGDARRALEVLSAGVEECGLVFSPSTY 305
>06_01_0122 + 944353-944451,944547-945080
Length = 210
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +1
Query: 286 KGDRLAVSLVRVQGLRMLAARAVWSAVLLQTCAPRPDRPLQAVRAQLCQRGE 441
KG LA L+++Q VW+ +++ A + A R LCQ GE
Sbjct: 132 KGAELATLLLQLQKDMWKLLAEVWTEIVVYVAASNEVERIMAHRNVLCQGGE 183
>03_05_0654 +
26479416-26479605,26480058-26480246,26480674-26480989,
26481286-26481844
Length = 417
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 302 RCRSCAYKGYECLQPVLSGRQYCYRHVLRD 391
RCR K + C + ++ +YC RH+ R+
Sbjct: 147 RCRRTDGKKWRCSKEAMADHKYCERHINRN 176
>02_05_0910 - 32684836-32685259,32685911-32685987,32686179-32686421
Length = 247
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 299 SRCRSCAYKGYECLQPVLSGRQYCYRHV 382
SRC +G+ C QP L G C H+
Sbjct: 169 SRCSRVNGRGWRCSQPTLVGYSLCEHHL 196
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,436,592
Number of Sequences: 37544
Number of extensions: 459469
Number of successful extensions: 1423
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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