Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_K24
         (947 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    26   0.57 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    24   1.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   4.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   5.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   5.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   9.3  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   9.3  

>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 25.8 bits (54), Expect = 0.57
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 166 AQ*WGTNKIRYPDNECEDYK 225
           AQ W  +++R P+N  EDY+
Sbjct: 58  AQSWRDSRLRLPENMSEDYR 77


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 166 AQ*WGTNKIRYPDNECEDYK 225
           AQ W  N++R P+N   +Y+
Sbjct: 89  AQTWKDNRLRLPENMTSEYR 108


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = +2

Query: 206  TNVRTIKPPDPEHVKKQEEEKLRAQVQKEIASRCRSCAYKGYECLQPVLSGRQYCYRHVL 385
            TN+ TI PP     ++Q ++  + Q Q+ I +        G   LQ     +Q   +HVL
Sbjct: 961  TNLTTILPPVKVQSQQQSQQSQQQQQQQTIVTN-----QAGKSILQTANIKQQSPQQHVL 1015

Query: 386  RDPT 397
               T
Sbjct: 1016 PGKT 1019


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +2

Query: 128 NLXKLIHLPKVRMLSSGGPTKSGIRITNVRTIKPPD 235
           NL +L H+P++   S+        R        PPD
Sbjct: 87  NLLRLFHIPQISPASTAKALSDKTRFDYFARTVPPD 122


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +2

Query: 128 NLXKLIHLPKVRMLSSGGPTKSGIRITNVRTIKPPD 235
           NL +L H+P++   S+        R        PPD
Sbjct: 177 NLLRLFHIPQISPASTAKALSDKTRFDYFARTVPPD 212


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +2

Query: 251 KQEEEKLRAQVQKEIASRCRSCAYKGY 331
           K++ E+ R +++KE+ S+      KG+
Sbjct: 484 KEDSEEFRQRLRKELDSKTGGVNLKGH 510


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 281 VQKEIASRCRSCAYKGYECLQPVLSGRQYCYRHVLRDP 394
           + KEI + CR+  Y G +C +      QY   H  ++P
Sbjct: 104 IGKEIVAVCRNEEYTGDDCQKTY----QYVQCHYKQNP 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,689
Number of Sequences: 438
Number of extensions: 4296
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31081323
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)