Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_K23
         (905 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.     113   8e-25
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...   113   8e-25
AF419855-1|AAP97290.1|  820|Homo sapiens Ser/Arg-related nuclear...    36   0.20 
AF048977-1|AAC09321.1|  820|Homo sapiens Ser/Arg-related nuclear...    36   0.20 
BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetit...    31   5.7  
AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetit...    31   5.7  
AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetit...    31   5.7  
AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetit...    31   5.7  
AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetit...    31   5.7  

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 191 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 370
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 371 HGQVIYTRATKGDDPVA 421
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 191 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 370
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 371 HGQVIYTRATKGDDPVA 421
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 191 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 370
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 371 HGQVIYTRATKGDDPVA 421
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 191 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 370
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 371 HGQVIYTRATKGDDPVA 421
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score =  113 bits (272), Expect = 8e-25
 Identities = 58/77 (75%), Positives = 61/77 (79%)
 Frame = +2

Query: 191 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 370
           LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL  KGLIK V +H
Sbjct: 44  LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103

Query: 371 HGQVIYTRATKGDDPVA 421
             QVIYTR TKG D  A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120


>AF419855-1|AAP97290.1|  820|Homo sapiens Ser/Arg-related nuclear
           matrix protein protein.
          Length = 820

 Score = 35.9 bits (79), Expect = 0.20
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 170
           PR+TRRL P++    RR R  P A  P+ R  P
Sbjct: 381 PRKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413


>AF048977-1|AAC09321.1|  820|Homo sapiens Ser/Arg-related nuclear
           matrix protein protein.
          Length = 820

 Score = 35.9 bits (79), Expect = 0.20
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 170
           PR+TRRL P++    RR R  P A  P+ R  P
Sbjct: 381 PRKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413


>BC036187-1|AAH36187.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 170
           PR+TRRL P++    RR R  P A   P+ R  P
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415


>AL445686-4|CAI14682.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 170
           PR+TRRL P++    RR R  P A   P+ R  P
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415


>AL445686-3|CAI14683.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 170
           PR+TRRL P++    RR R  P A   P+ R  P
Sbjct: 377 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 410


>AL445648-3|CAH73090.1|  904|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 904

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 170
           PR+TRRL P++    RR R  P A   P+ R  P
Sbjct: 382 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415


>AL445648-2|CAH73089.1|  913|Homo sapiens serine/arginine repetitive
           matrix 1 protein.
          Length = 913

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 72  PRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 170
           PR+TRRL P++    RR R  P A   P+ R  P
Sbjct: 377 PRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 410


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,432,084
Number of Sequences: 237096
Number of extensions: 2138792
Number of successful extensions: 8554
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8526
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)