Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K22
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.17
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.29
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.51
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.51
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.51
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 29 4.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.3
AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical... 29 6.3
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/112 (25%), Positives = 29/112 (25%), Gaps = 3/112 (2%)
Frame = +3
Query: 489 PFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNPXKKLFSXXXXXXXXXXXXXXXXXX 668
P PPP P G G PP G P+ G P S
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 669 XXXXXPPXXKXKKKTPPXLRGGXPPXXXKKXPGFPP---XXTPPGXPPXXPP 815
P PP GG PP P PP P PP P
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 31.1 bits (67), Expect = 1.2
Identities = 32/133 (24%), Positives = 36/133 (27%), Gaps = 2/133 (1%)
Frame = +3
Query: 447 PPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGN-PXKKLFSXXX 623
PPP + P PPP P G PP G P GG+ P + S
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 624 XXXXXXXXXXXXXXXXXXXXPPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPP-GXP 800
P PP R G PP +PP G P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 359
Query: 801 PXXPPRXXKEXXS 839
P P E S
Sbjct: 360 PRGGPGKSSEESS 372
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXX-TPPGXPPXXPP 815
PP K +PP G PP PP +PP P PP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/112 (25%), Positives = 29/112 (25%), Gaps = 3/112 (2%)
Frame = +3
Query: 489 PFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNPXKKLFSXXXXXXXXXXXXXXXXXX 668
P PPP P G G PP G P+ G P S
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 669 XXXXXPPXXKXKKKTPPXLRGGXPPXXXKKXPGFPP---XXTPPGXPPXXPP 815
P PP GG PP P PP P PP P
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 31.1 bits (67), Expect = 1.2
Identities = 32/133 (24%), Positives = 36/133 (27%), Gaps = 2/133 (1%)
Frame = +3
Query: 447 PPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGN-PXKKLFSXXX 623
PPP + P PPP P G PP G P GG+ P + S
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 624 XXXXXXXXXXXXXXXXXXXXPPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPP-GXP 800
P PP R G PP +PP G P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 380
Query: 801 PXXPPRXXKEXXS 839
P P E S
Sbjct: 381 PRGGPGKSSEESS 393
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXX-TPPGXPPXXPP 815
PP K +PP G PP PP +PP P PP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.17
Identities = 28/112 (25%), Positives = 29/112 (25%), Gaps = 3/112 (2%)
Frame = +3
Query: 489 PFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNPXKKLFSXXXXXXXXXXXXXXXXXX 668
P PPP P G G PP G P+ G P S
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 669 XXXXXPPXXKXKKKTPPXLRGGXPPXXXKKXPGFPP---XXTPPGXPPXXPP 815
P PP GG PP P PP P PP P
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 31.1 bits (67), Expect = 1.2
Identities = 32/133 (24%), Positives = 36/133 (27%), Gaps = 2/133 (1%)
Frame = +3
Query: 447 PPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGN-PXKKLFSXXX 623
PPP + P PPP P G PP G P GG+ P + S
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSP-PPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 624 XXXXXXXXXXXXXXXXXXXXPPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPP-GXP 800
P PP R G PP +PP G P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 365
Query: 801 PXXPPRXXKEXXS 839
P P E S
Sbjct: 366 PRGGPGKSSEESS 378
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXX-TPPGXPPXXPP 815
PP K +PP G PP PP +PP P PP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPP 815
PP + PP L GG PP PG PP P G PP PP
Sbjct: 1575 PPRGGSHCQGPPPLMGGPPPRLGMPPPGPPP---PNGGPP--PP 1613
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPP--GXPPXXPP 815
PP GG PP P PP PP G PP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPPRXXK 827
PP GG PP P PP P PP PP K
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 399 PXPGGXXXIFSXXKKXPPPXXXGXXFXAPXPFPPPKXPXP 518
P PGG I PPP P P PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXP----GFPPXXTPPGXPPXXPP 815
PP PP G PP P G PP PPG P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 26.2 bits (55), Expect(2) = 0.82
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +3
Query: 447 PPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNP 596
PPP P P PPP P G G PP GL P + G P
Sbjct: 714 PPPPGLPPITGGPPP-PPPPGGLPPITG-GPPPPPPPGGL---PPISGGP 758
Score = 23.8 bits (49), Expect(2) = 0.82
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGF---PPXXTPPG 794
PP PP G PP GF PP PPG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPP--GXPPXXPP 815
PP GG PP P PP PP G PP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPPRXXK 827
PP GG PP P PP P PP PP K
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 399 PXPGGXXXIFSXXKKXPPPXXXGXXFXAPXPFPPPKXPXP 518
P PGG I PPP P P PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXP----GFPPXXTPPGXPPXXPP 815
PP PP G PP P G PP PPG P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 26.2 bits (55), Expect(2) = 0.82
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +3
Query: 447 PPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNP 596
PPP P P PPP P G G PP GL P + G P
Sbjct: 714 PPPPGLPPITGGPPP-PPPPGGLPPITG-GPPPPPPPGGL---PPISGGP 758
Score = 23.8 bits (49), Expect(2) = 0.82
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGF---PPXXTPPG 794
PP PP G PP GF PP PPG
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPP--GXPPXXPP 815
PP GG PP P PP PP G PP PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPPRXXK 827
PP GG PP P PP P PP PP K
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 399 PXPGGXXXIFSXXKKXPPPXXXGXXFXAPXPFPPPKXPXP 518
P PGG I PPP P P PPP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 4/48 (8%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXP----GFPPXXTPPGXPPXXPP 815
PP PP G PP P G PP PPG P PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 26.2 bits (55), Expect(2) = 0.84
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = +3
Query: 447 PPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNP 596
PPP P P PPP P G G PP GL P + G P
Sbjct: 297 PPPPGLPPITGGPPP-PPPPGGLPPITG-GPPPPPPPGGL---PPISGGP 341
Score = 23.8 bits (49), Expect(2) = 0.84
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGF---PPXXTPPG 794
PP PP G PP GF PP PPG
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGF-PPXXTPPGXPPXXPP 815
PP + P G PP + GF PP P G PP PP
Sbjct: 720 PPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPPGAPP 764
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPPR 818
PP PP R G P P P P G PP PPR
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/101 (23%), Positives = 27/101 (26%)
Frame = +3
Query: 441 KXPPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNPXKKLFSXX 620
+ PPP G P P PPP P G PP P +GG P
Sbjct: 286 RPPPPPSSGMW---PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 342
Query: 621 XXXXXXXXXXXXXXXXXXXXXPPXXKXKKKTPPXLRGGXPP 743
PP + PP G PP
Sbjct: 343 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 383
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 714 PPXLR--GGXPPXXXKKXPGFPPXXTPPGXPPXXPP 815
PP +R GG PP + P P PP PP PP
Sbjct: 338 PPGMRYPGGMPPPPPPRYPSAGPGMYPP-PPPSRPP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPPR 818
PP PP R G P P P P G PP PPR
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/101 (23%), Positives = 27/101 (26%)
Frame = +3
Query: 441 KXPPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLLVSPKLGGNPXKKLFSXX 620
+ PPP G P P PPP P G PP P +GG P
Sbjct: 296 RPPPPPSSGMW---PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMR 352
Query: 621 XXXXXXXXXXXXXXXXXXXXXPPXXKXKKKTPPXLRGGXPP 743
PP + PP G PP
Sbjct: 353 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPP 393
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 714 PPXLR--GGXPPXXXKKXPGFPPXXTPPGXPPXXPP 815
PP +R GG PP + P P PP PP PP
Sbjct: 348 PPGMRYPGGMPPPPPPRYPSAGPGMYPP-PPPSRPP 382
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPP 815
PP PP GG PP G PP G PP PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMG-GIPPPPPMFGAPPPPPP 119
Score = 29.5 bits (63), Expect = 3.6
Identities = 26/73 (35%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Frame = +3
Query: 399 PXPGGXXX---IFSXXKKXPPPXXXGXXFXAPXPFPPPKXPXPXXXGXGXXFXPPXXGLL 569
P PGG +F+ PPP G P PP P P G G PP
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP--PPPPPSGLGVAPQPPRPKTP 135
Query: 570 VSP---KLGG-NP 596
V+P KLGG NP
Sbjct: 136 VNPALAKLGGKNP 148
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +3
Query: 696 KXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPP 815
K + TP + G PP P PP P PP PP
Sbjct: 469 KVENPTPVIVDGARPPP---SPPALPPALPNPNEPPPPPP 505
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 518 GXGXFWGGKGXGGXKXXPXXXGGGG 444
G G WGG G GG GGGG
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGG 100
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 684 PPXXKXKKKTPPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXPPR 818
PP + + PP P P P TPP P PPR
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPR 185
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 714 PPXLRGGXPPXXXKKXPGFPPXXTPPGXPPXXP 812
PP PP PG+PP PPG P P
Sbjct: 699 PPMFNLNAPPPPG--IPGYPPAPPPPGVGPPPP 729
>AF003130-14|AAB54129.1| 892|Caenorhabditis elegans Hypothetical
protein F55A12.1 protein.
Length = 892
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 738 PPXXXKKXPGFPPXXTPPGXPPXXPP 815
PP P PP PPG P PP
Sbjct: 5 PPQPHPPMPPMPPVTAPPGTMPPMPP 30
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 589 PPNXGETNNPXXGGXNXXPXPKXXGXGXFGGGKGXGAXKXXPXXXGGG 446
PP T P P P G G FGGG G GGG
Sbjct: 852 PPATQATAAPVTAPKPVAPAPSPFGGGGFGGGGGGFGGGNRGNGFGGG 899
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,346,821
Number of Sequences: 27780
Number of extensions: 218950
Number of successful extensions: 1469
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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