Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K20
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0994 - 13067254-13067379,13067483-13067521,13067824-130678... 31 0.96
01_05_0490 + 22672241-22674679 31 0.96
12_02_1152 + 26515422-26515460,26516317-26516454,26518647-265188... 29 3.9
07_03_0954 - 22864240-22864403,22864821-22864935,22865421-22865462 29 3.9
06_01_0040 - 393818-393938,394331-394389,394595-394756,394875-39... 29 3.9
03_06_0422 + 33818887-33819996 29 3.9
02_05_0675 + 30804143-30804384,30804582-30804752,30806277-30806505 29 3.9
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 29 5.1
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 29 6.7
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 29 6.7
06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247 28 8.9
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510... 28 8.9
>03_02_0994 -
13067254-13067379,13067483-13067521,13067824-13067893,
13068025-13068116,13068237-13068319,13068590-13068633,
13068682-13068800,13068883-13068915,13069152-13069239,
13069364-13069413
Length = 247
Score = 31.5 bits (68), Expect = 0.96
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 137 VCRQTDRPCSQVCHLLQLCTGATTCSCTHPYTDGTCCPYTALC 265
VC T++P +QVC+ +C G CS + D C LC
Sbjct: 51 VC-DTEQPVAQVCYNCGVCMGEYFCSACKFFDDDVRCRCCLLC 92
>01_05_0490 + 22672241-22674679
Length = 812
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 280 RPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMPGTPP 423
+P + + T+T P L R+W + E+VLEQ S + MP PP
Sbjct: 296 QPQQPVETVTPTPPPLAR-SRRWNPEMLEVVLEQESRVEETTMPPPPP 342
>12_02_1152 +
26515422-26515460,26516317-26516454,26518647-26518809,
26519165-26519213,26519315-26519390,26520348-26520473
Length = 196
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = -2
Query: 314 SRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQCRVAEDGRPGCRGDQSG 144
S +N+++ RCG HC L + L + + H + E G GC DQSG
Sbjct: 20 SMLNIVTVRCG----HCTNLLSVNLRGLMHSAPALQDHHHHHLQESGLSGCFRDQSG 72
>07_03_0954 - 22864240-22864403,22864821-22864935,22865421-22865462
Length = 106
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 137 VCRQTDRPCSQVCHLLQLCTGATTCSCTHPYTDG 238
+CRQ + C CH++ LC G + S P T G
Sbjct: 38 ICRQVEAGCFAHCHIV-LCKGEPSRSPFRPVTSG 70
>06_01_0040 -
393818-393938,394331-394389,394595-394756,394875-395085,
395174-395290,395794-395859,396020-396292,397410-397492,
398322-398327,398738-398797,399093-399137,399530-399639,
400412-400510,400599-400796,401463-401517,401571-401628,
402191-402360
Length = 630
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 8/54 (14%)
Frame = +1
Query: 25 IVEFLKILTQKLNIPKAGLLL-LGVLCC-------RAPHLIKTKCCLPPD*SPL 162
+ E+ ++L Q LN+P L++ LGVL +A HL++ C +P D SP+
Sbjct: 81 VTEYFRVL-QFLNLPGGDLIINLGVLAAPQVVLPQQASHLMEQGCLIPMDISPV 133
>03_06_0422 + 33818887-33819996
Length = 369
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 524 ESEEQQERHHKTEQTHGLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTS 354
E ++ER + E+T L + N E ++L+G D+ +D SNTSSG S
Sbjct: 156 ERMRERERERRRERTESLILINSNN---EAIILQGT---FGPDDNQDDSSNTSSGVS 206
>02_05_0675 + 30804143-30804384,30804582-30804752,30806277-30806505
Length = 213
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -1
Query: 291 PMWSGRTALQRAV*GQQVPSVYGWVQLQVVAPVQSCRRWQTWLQGRSVW 145
P+W G ++ AV G + P+ +G+ + ++ P Q+ + W+ VW
Sbjct: 8 PVWHGVWMVEDAVTGDEFPAWHGYGRRRMQPPGQAPAWCRAWIAKDVVW 56
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +1
Query: 139 LPPD*SPLQPGLPSSATLHWCDHLQLYPPIHRWYLLSLHSSLQCGPSRPHRS--LRTLTL 312
+PP PL+P +PSS+ H LQ + L +HS +RP S L L
Sbjct: 183 VPPPPPPLEPPVPSSSDYHAKPPLQAV----KSSLFPIHSGSPAATARPPSSHTLHQAHL 238
Query: 313 LPNS 324
+PN+
Sbjct: 239 MPNA 242
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 28.7 bits (61), Expect = 6.7
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = -2
Query: 380 CSNTSSGTSYSHCRCT---STNEF--GSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGY 216
C N ++G Y C C+ S N + G +N+ EGP SR + GGY
Sbjct: 261 CVNATNGKGYL-CNCSAGYSGNPYVTGGCININECELRREGPAMYPCYSGSRCYDTEGGY 319
Query: 215 SCK 207
CK
Sbjct: 320 KCK 322
>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = -2
Query: 368 SSGTSYSHCRCT--STNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYSCKWSHQ 195
SSGT + +C S N+ S ++ S+ + L +D YH C G S +
Sbjct: 1441 SSGTLNNFAKCCGDSANK-NSLLDQTSENVSTDHQEVSMLPQDQHYHSCSGDTSSALEYS 1499
Query: 194 CRVAEDGRPGCRG--DQSGGRQHF 129
A DG R DQ GG +
Sbjct: 1500 DTNAGDGDSEHRNSFDQKGGESMY 1523
>06_02_0028 + 10755164-10755668,10755740-10756283,10756372-10758247
Length = 974
Score = 28.3 bits (60), Expect = 8.9
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = -2
Query: 572 LICRMXVVVFLKVNSLESEEQQERHHKTEQTHGLRQGETQNGV*EQLLLEGGVPGIADDE 393
L C + + + + ++ +T + Q T NG E L GG ++ +
Sbjct: 331 LACIIVLKAIISCQTYSNDRSNNVEEQTSTGNCRAQINTSNGGAESLSSNGGAESVSSNG 390
Query: 392 GAEDCSNTSSG--TSYSHCRCTSTNEFGSRVN 303
GAE S+ + T+ + T T+ G++ N
Sbjct: 391 GAESVSSNARAQPTTTNGGEETKTSNAGAQKN 422
>04_04_1696 +
35448667-35449641,35449726-35450562,35450667-35451001,
35451371-35451497,35451594-35451752,35451872-35453053,
35453164-35453424,35453513-35453761
Length = 1374
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -2
Query: 704 IINNCIPVDAHCRCNTHQSLHHYEGEVSKHSIPWLSTPDS 585
+ N +P D C + SL Y K ++P+ + PDS
Sbjct: 385 VSNRSLPTDYDVTCTSRGSLLEYHDGDHKATVPFTNKPDS 424
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,508,042
Number of Sequences: 37544
Number of extensions: 467230
Number of successful extensions: 1523
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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