Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K19
(922 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27 pro... 72 3e-12
L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein. 72 3e-12
BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27 (... 72 3e-12
BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-l... 72 3e-12
BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27 (... 72 3e-12
AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27 ... 72 3e-12
AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27 p... 72 3e-12
BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein. 65 4e-10
AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27 p... 57 1e-07
>U57847-1|AAB02266.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>L19739-1|AAA59867.1| 84|Homo sapiens metallopanstimulin protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>BC070219-1|AAH70219.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>BC003667-1|AAH03667.1| 84|Homo sapiens ribosomal protein S27-like
protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>BC002658-1|AAH02658.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>AL358472-19|CAI14033.1| 84|Homo sapiens ribosomal protein S27
(metallopanstimulin 1) protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>AB061845-1|BAB79483.1| 84|Homo sapiens ribosomal protein S27
protein.
Length = 84
Score = 71.7 bits (168), Expect = 3e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSFR 331
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEGCSFR
Sbjct: 22 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFR 80
Query: 332 K 334
+
Sbjct: 81 R 81
>BC047648-1|AAH47648.1| 113|Homo sapiens RPS27L protein protein.
Length = 113
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLTEGCSF 328
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LTEG SF
Sbjct: 38 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95
>AB007162-1|BAA25825.1| 69|Homo sapiens ribosomal protein S27
protein.
Length = 69
Score = 56.8 bits (131), Expect = 1e-07
Identities = 28/54 (51%), Positives = 34/54 (62%)
Frame = +2
Query: 152 QRLVPHPHSSFMAVXVPWLLQAXNSFXSRTXXVVVCAGCSTILCQPTGGRAXLT 313
+RLV P+S FM V P + F S VV+C GCST+LCQPTGG+A LT
Sbjct: 17 KRLVQSPNSYFMDVKCPGCYKITTVF-SHAQTVVLCVGCSTVLCQPTGGKARLT 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,969,136
Number of Sequences: 237096
Number of extensions: 1279820
Number of successful extensions: 1583
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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