Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K18
(945 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 229 2e-60
09_03_0031 + 11735431-11735728,11736704-11737041,11737150-117372... 30 3.1
06_01_0693 - 5056207-5056596 29 4.1
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 29 4.1
02_03_0007 - 13875735-13875826,13876217-13877465 29 4.1
02_01_0429 - 3132848-3135043 29 4.1
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 29 4.1
04_04_1476 - 33863067-33863148,33863239-33863310,33863393-338634... 29 5.4
05_06_0070 + 25342965-25343882,25343968-25344618 28 9.4
02_01_0428 - 3127098-3129254 28 9.4
01_01_0327 + 2659822-2660232,2660906-2660959 28 9.4
>09_02_0058 -
3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 229 bits (561), Expect = 2e-60
Identities = 116/185 (62%), Positives = 135/185 (72%)
Frame = +1
Query: 331 DELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGNFI 510
DELKNED+QLRLNSI++LSTIA ALG ERT+ ELIPFL+E DEDEVLLA+AE+LG FI
Sbjct: 16 DELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDEDEVLLAMAEELGVFI 75
Query: 511 NLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQRLAG 690
VGG E AH LLPPLETL VEET VRDKAV SL + + + FVP+V+RLA
Sbjct: 76 PYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKESDIVDWFVPVVKRLAA 135
Query: 691 GDWFTSRTSACGLFSVCYPRVSAVVKAELRQHFCSLCQDDTPMVRRAAAYKLGEFAKVVX 870
G+WFT+R S+CGLF + YP +KAELR + LCQDD PMVRRAAA LG+FA V
Sbjct: 136 GEWFTARVSSCGLFHIAYPSAPDQLKAELRTIYGQLCQDDMPMVRRAAASNLGKFAATVE 195
Query: 871 IEYXK 885
Y K
Sbjct: 196 QNYLK 200
Score = 49.2 bits (112), Expect = 5e-06
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Frame = +1
Query: 325 FYDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAEQLG 501
F LK+E +RLN I KL + +G++ L+P + E D V LA+ E +
Sbjct: 363 FLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIP 422
Query: 502 NFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQR 681
+ +G G F L + +RD A +L+ +AE P+ +H +P V
Sbjct: 423 LLASQLGVGFFDDKLGALCMQWLEDKVFSIRDAAANNLKRLAEEFGPEWAMQHIIPQVLE 482
Query: 682 LAGGDWFTSRTSACGLFSVCYPRVSAVVKAE 774
+ R + S+ P + A + +
Sbjct: 483 KINNPHYLYRMTILQAISLLAPVMGAEITCQ 513
Score = 45.6 bits (103), Expect = 6e-05
Identities = 43/189 (22%), Positives = 76/189 (40%), Gaps = 2/189 (1%)
Frame = +1
Query: 316 MTCFYDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDED-EVLLALAE 492
M+ F D +++ +RL +++ + + L + + ++P + D+ V +A
Sbjct: 204 MSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVAN 263
Query: 493 QLGNFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPL 672
QL VG L+P L E VR A + SPQ +H +P
Sbjct: 264 QLYELCEAVGPEHSREQLVPAYVRLLRDNEAEVRIAAAGKVTKFCRILSPQLAIQHILPC 323
Query: 673 VQRLAGGDWFTSRTSACGLFSVCYPRVSAVVKAE-LRQHFCSLCQDDTPMVRRAAAYKLG 849
V+ L+ R++ + P + E L F SL +D+ P VR KL
Sbjct: 324 VKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFLSLLKDEFPDVRLNIISKLD 383
Query: 850 EFAKVVXIE 876
+ +V+ I+
Sbjct: 384 QVNQVIGID 392
>09_03_0031 +
11735431-11735728,11736704-11737041,11737150-11737285,
11737477-11737613,11737701-11737824,11738859-11739364
Length = 512
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 516 GWRGRICTLSPSSTGDISGSGRNSSPRQGSG 608
GW R + S S +G SGS R PR+GSG
Sbjct: 26 GWCRRSRSRSGSRSGSGSGSSRRRLPRKGSG 56
>06_01_0693 - 5056207-5056596
Length = 129
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 706 SRTSACGLFSVCYPRVSAVVKAE-LRQHFCSLCQDDT-PMVRRAAAYK 843
+R CG C PR A V+ E + + C LC + +RRA A K
Sbjct: 6 ARCECCGFTEECTPRYIAAVREEYMGRWVCGLCAEAVGDEIRRAGAGK 53
>02_05_1074 -
33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 337 LKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLL 480
L + D QLR ++ + +G + L+P+L + + DE EV+L
Sbjct: 754 LNDRDEQLRAVYFGQIVVVCYFIGSRSVEEYLLPYLEQALSDEMEVVL 801
>02_03_0007 - 13875735-13875826,13876217-13877465
Length = 446
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 469 EVLLALAEQLGNFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQA 648
E+LL +L + +GG EF+ +P A+ ++ ++ + AV H SP+A
Sbjct: 219 ELLLINTPRLDSLKITLGGNEFS---VPFSRARIALTNPLLEIESAKEITAVPPHESPKA 275
Query: 649 LEEHFVP 669
L E VP
Sbjct: 276 LLEDEVP 282
>02_01_0429 - 3132848-3135043
Length = 731
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 891 GRFXIFDXYDFSELPKFVGGSASHH 817
G+F FD F+ PK GG SHH
Sbjct: 647 GQFDTFDNSSFTGNPKLCGGMLSHH 671
>02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 891 GRFXIFDXYDFSELPKFVGGSASHH 817
G+F FD F+ PK GG SHH
Sbjct: 1070 GQFDTFDNSSFTGNPKLCGGMLSHH 1094
>04_04_1476 -
33863067-33863148,33863239-33863310,33863393-33863472,
33863549-33863611,33863837-33863924,33864277-33864339,
33864421-33864494,33864683-33864732,33866126-33866295,
33867041-33867120
Length = 273
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = -1
Query: 462 IIDCLSEERDQLRFSPL-HAQSQRDRRQLLYRVQT--KLYXXXXXXIVKTSHLF 310
I+DCLS+ D SP+ H + R+ L+Y V T +Y V+ +HLF
Sbjct: 101 ILDCLSKSSDSDHSSPVEHLSCRSSRKTLIYLVLTLSHMYPDYDFSAVR-AHLF 153
>05_06_0070 + 25342965-25343882,25343968-25344618
Length = 522
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 460 DEDEVLLALAEQLGNFINLVGGGEFAHCLLPPLETL---AAVEETVVRDKAVAS 612
DED V + EQLG L + A L PP+ L A+E+TV+ VA+
Sbjct: 353 DEDTVAVVREEQLGKMTLLRAAMKEAMRLHPPVPLLIPREAIEDTVLHGHRVAA 406
>02_01_0428 - 3127098-3129254
Length = 718
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 891 GRFXIFDXYDFSELPKFVGGSASHH 817
G+F FD F PK GG SHH
Sbjct: 642 GQFDTFDNSSFIGNPKLCGGMLSHH 666
>01_01_0327 + 2659822-2660232,2660906-2660959
Length = 154
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -3
Query: 841 CRRQRVAPSECHLGRASKNA--DEVPPSLRPKR 749
C R+R+A S LGR+S +A D+ PP P+R
Sbjct: 85 CYRRRLASSPRTLGRSSASARGDDAPPFHLPRR 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,944,006
Number of Sequences: 37544
Number of extensions: 521807
Number of successful extensions: 1538
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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