Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K15
(920 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 9.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 9.0
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 256 PPDSGEKLSLGVTILL 271
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 219 PPDSGEKLTLGVTILL 234
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 219 PPDSGEKLTLGVTILL 234
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 219 PPDSGEKLTLGVTILL 234
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 219 PPDSGEKLTLGVTILL 234
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 219 PPDSGEKLTLGVTILL 234
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 219 PPDSGEKLTLGVTILL 234
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 287 PPDSGEKLTLGVTILL 302
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 3.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 725 PPDSGEPLGRGTKIVL 772
PPDSGE L G I+L
Sbjct: 287 PPDSGEKLTLGVTILL 302
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 3.9
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 719 HSPPDSGEPLGRGTKIVL 772
H PD + +G GTK+++
Sbjct: 444 HDQPDKYDLIGNGTKLII 461
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.8
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 708 GXSFTVRQTAVSPLVEVQRSSFTSK-RTWAEFMEEXKSKRS*RNIPSHGYPIKLMVE 875
G + +V V+ L+ + R S T E + + + R IPS Y +K MVE
Sbjct: 217 GAASSVTSIQVANLLRLFRIPLVSFFSTSPELSNKQRFEYFTRTIPSDHYQVKAMVE 273
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 760 KDRPSRQRGLGQNSWKNXNQ-RDRKET 837
+ R SR R QNS+KN + R +ET
Sbjct: 35 RKRNSRSREREQNSYKNEREYRKYRET 61
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 9.0
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 760 KDRPSRQRGLGQNSWKNXNQ-RDRKET 837
+ R SR R QNS+KN + R +ET
Sbjct: 35 RKRNSRSREREQNSYKNEREYRKYRET 61
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,851
Number of Sequences: 438
Number of extensions: 4844
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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