Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_K10
         (916 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    29   0.059
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    29   0.059
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.7  

>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 0.059
 Identities = 16/70 (22%), Positives = 28/70 (40%)
 Frame = +1

Query: 622 CPNLKRVAPKVIPDGARMLAKIINRLNRGDGHSFRSFYSATSFRMWKDLMSHYPNLKADK 801
           C N  R   K++PD         N   +   +   ++      + W+ L + Y +    K
Sbjct: 53  CTNEGRELKKILPDALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGEYK 112

Query: 802 KRMDHSLRCA 831
           KR +H L+ A
Sbjct: 113 KRYEHGLQFA 122


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 29.1 bits (62), Expect = 0.059
 Identities = 16/70 (22%), Positives = 28/70 (40%)
 Frame = +1

Query: 622 CPNLKRVAPKVIPDGARMLAKIINRLNRGDGHSFRSFYSATSFRMWKDLMSHYPNLKADK 801
           C N  R   K++PD         N   +   +   ++      + W+ L + Y +    K
Sbjct: 53  CTNEGRELKKILPDALSTGCNKCNEKQKHTANKVVNYLKTKRPKDWERLSAKYDSTGEYK 112

Query: 802 KRMDHSLRCA 831
           KR +H L+ A
Sbjct: 113 KRYEHGLQFA 122


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 59  YQNATDVQNHKMSKCQRRYIYKKCLSLKIGTQFLFVSTSDVPSD 190
           ++N  D+    M +  R Y Y++ +  K+  Q L     DVP D
Sbjct: 503 HKNKPDMNYETMGRALR-YYYQRGILAKVDGQRLVYQFVDVPKD 545


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,936
Number of Sequences: 438
Number of extensions: 5045
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)