Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_K09
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1676 - 35302498-35302836,35302911-35302997,35303063-353032...    31   0.96 
04_01_0276 + 3658852-3660894                                           28   9.0  

>04_04_1676 -
           35302498-35302836,35302911-35302997,35303063-35303286,
           35303375-35303675,35303762-35303860,35304895-35305032,
           35305108-35305326
          Length = 468

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +1

Query: 520 PQMDPTCSYMTTPQCPTAAYMLVIRKIILRQEEDQNTGAFTSDARVVRSNKSNR 681
           P+M P+      P+  T A    +R   ++ E+D  TG  TS A   +S+ SNR
Sbjct: 390 PEMAPSSPPAEPPETATEAAGSAVRPASIKLEKDDTTG--TSPADTAKSSSSNR 441


>04_01_0276 + 3658852-3660894
          Length = 680

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 556 PQCPTAAYMLVIRKIILRQEEDQNTGAFT--SDARVVRSNKSNR 681
           P+ P   Y   I KI+L +EED+    F   +D  +  +N+ NR
Sbjct: 609 PEIPRLKYAREIAKIVLEREEDKKDILFDLWTDFLIYAANRCNR 652


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,478,627
Number of Sequences: 37544
Number of extensions: 407060
Number of successful extensions: 1049
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)