Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_K09
(912 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75710-7|CAN99690.1| 855|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z75710-6|CAB00028.1| 857|Caenorhabditis elegans Hypothetical pr... 32 0.49
AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin p... 31 1.5
Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical p... 30 2.6
Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical p... 30 2.6
AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein. 30 2.6
>Z75710-7|CAN99690.1| 855|Caenorhabditis elegans Hypothetical
protein D1081.7b protein.
Length = 855
Score = 32.3 bits (70), Expect = 0.49
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 547 MTTPQCPTAAYMLVIRKIILRQ----EEDQNTGAFTSDARVVRSNKSNRGKPRIFGKDVE 714
+ + QCP ++ LV + ILRQ E+D NT T ++S++ N R + ++
Sbjct: 379 VASQQCPVSS-SLVPQNGILRQSRAQEDDNNTSILT-----IQSSRRNHSVLR--HRTIK 430
Query: 715 C-NPLTTL*RFKSTHXTLPYEKXLSKSIPEACDRIISFLGKLI 840
NP L TH ++PYE LS CD+II LGK I
Sbjct: 431 PRNPTQNLAEVVKTHGSIPYE-ALSD-----CDKIIVDLGKNI 467
>Z75710-6|CAB00028.1| 857|Caenorhabditis elegans Hypothetical
protein D1081.7a protein.
Length = 857
Score = 32.3 bits (70), Expect = 0.49
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 547 MTTPQCPTAAYMLVIRKIILRQ----EEDQNTGAFTSDARVVRSNKSNRGKPRIFGKDVE 714
+ + QCP ++ LV + ILRQ E+D NT T ++S++ N R + ++
Sbjct: 381 VASQQCPVSS-SLVPQNGILRQSRAQEDDNNTSILT-----IQSSRRNHSVLR--HRTIK 432
Query: 715 C-NPLTTL*RFKSTHXTLPYEKXLSKSIPEACDRIISFLGKLI 840
NP L TH ++PYE LS CD+II LGK I
Sbjct: 433 PRNPTQNLAEVVKTHGSIPYE-ALSD-----CDKIIVDLGKNI 469
>AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin
protein 1 protein.
Length = 184
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3
Query: 690 ANLRERRRMQSINDALK 740
AN RERRRM S+NDAL+
Sbjct: 67 ANARERRRMNSLNDALE 83
>Z73909-2|CAD36493.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 490 CQSP*VDLRHPQMDPTCSYMTTPQCPTAAYMLV 588
C+S VDL+HP + P SY+ C T +LV
Sbjct: 266 CESE-VDLQHPLLSPALSYLNDCTCNTIRCILV 297
>Z73909-1|CAA98133.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 490 CQSP*VDLRHPQMDPTCSYMTTPQCPTAAYMLV 588
C+S VDL+HP + P SY+ C T +LV
Sbjct: 266 CESE-VDLQHPLLSPALSYLNDCTCNTIRCILV 297
>Z73907-2|CAA98125.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 490 CQSP*VDLRHPQMDPTCSYMTTPQCPTAAYMLV 588
C+S VDL+HP + P SY+ C T +LV
Sbjct: 266 CESE-VDLQHPLLSPALSYLNDCTCNTIRCILV 297
>Z73906-15|CAD36486.1| 921|Caenorhabditis elegans Hypothetical
protein D2030.10b protein.
Length = 921
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 490 CQSP*VDLRHPQMDPTCSYMTTPQCPTAAYMLV 588
C+S VDL+HP + P SY+ C T +LV
Sbjct: 266 CESE-VDLQHPLLSPALSYLNDCTCNTIRCILV 297
>Z73906-14|CAA98122.2| 1009|Caenorhabditis elegans Hypothetical
protein D2030.10a protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 490 CQSP*VDLRHPQMDPTCSYMTTPQCPTAAYMLV 588
C+S VDL+HP + P SY+ C T +LV
Sbjct: 266 CESE-VDLQHPLLSPALSYLNDCTCNTIRCILV 297
>AF324832-1|AAL82897.1| 1009|Caenorhabditis elegans AEX-1 protein.
Length = 1009
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 490 CQSP*VDLRHPQMDPTCSYMTTPQCPTAAYMLV 588
C+S VDL+HP + P SY+ C T +LV
Sbjct: 266 CESE-VDLQHPLLSPALSYLNDCTCNTIRCILV 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,785,691
Number of Sequences: 27780
Number of extensions: 366095
Number of successful extensions: 981
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -