Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_K07
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0278 + 28911722-28911934,28912154-28913055,28913142-289135...    29   5.1  
08_01_1011 + 10226160-10226676,10226794-10226810,10227677-102278...    28   8.8  

>05_07_0278 +
           28911722-28911934,28912154-28913055,28913142-28913581,
           28913628-28913955,28914101-28914743
          Length = 841

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 436 DAYSSEHSMSQDQGKIQHQVDEEALSNEDVEPAPVXXKXXXXXXXXKYRGRG 591
           D + SE ++    G +QH VDE  L   D   APV           + RGRG
Sbjct: 331 DIHQSEKTIEGSFGAVQHLVDELLL---DAAAAPVATSSRQDQLSCRCRGRG 379


>08_01_1011 +
           10226160-10226676,10226794-10226810,10227677-10227886,
           10227921-10228406
          Length = 409

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +1

Query: 376 RTTLSGIPLIQDDNDQGWRPDAYSSEHSMSQDQGKIQHQVDEEALSNED 522
           +T+L  I   + D D+    D  +SE  + +D    + ++DE++LS+ED
Sbjct: 243 KTSLGQIAYSEWDEDE-IDEDPLNSEDEIDEDPLNSEDEIDEDSLSSED 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,883,498
Number of Sequences: 37544
Number of extensions: 393124
Number of successful extensions: 934
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)