Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J23
(1166 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 33 1.5
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 33 1.5
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 33 1.5
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 32 3.5
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 32 3.5
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 32 3.5
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 32 3.5
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 32 3.5
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 32 3.5
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 32 3.5
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 32 3.5
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 32 3.5
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 32 3.5
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 32 3.5
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 8.0
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.5
Identities = 29/118 (24%), Positives = 30/118 (25%), Gaps = 1/118 (0%)
Frame = +1
Query: 367 PXXPRVXSPXXXLXGPPXSXXPXP-PXXHXPPFSXXXLXPXXXSXXPPXXXXXLXPXPPX 543
P V SP PP P P P PP P PP P P
Sbjct: 289 PKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPP 348
Query: 544 XQXTXRXDPLSRXLXPPPXXXKTXXXXXXPXPXHXTPXXXXAPP*TRX*PPXKPPXIP 717
P PPP P + APP PP PP P
Sbjct: 349 PPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.5
Identities = 29/118 (24%), Positives = 30/118 (25%), Gaps = 1/118 (0%)
Frame = +1
Query: 367 PXXPRVXSPXXXLXGPPXSXXPXP-PXXHXPPFSXXXLXPXXXSXXPPXXXXXLXPXPPX 543
P V SP PP P P P PP P PP P P
Sbjct: 289 PKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPP 348
Query: 544 XQXTXRXDPLSRXLXPPPXXXKTXXXXXXPXPXHXTPXXXXAPP*TRX*PPXKPPXIP 717
P PPP P + APP PP PP P
Sbjct: 349 PPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.5
Identities = 29/118 (24%), Positives = 30/118 (25%), Gaps = 1/118 (0%)
Frame = +1
Query: 367 PXXPRVXSPXXXLXGPPXSXXPXP-PXXHXPPFSXXXLXPXXXSXXPPXXXXXLXPXPPX 543
P V SP PP P P P PP P PP P P
Sbjct: 289 PKRSSVVSPSHPPPAPPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPP 348
Query: 544 XQXTXRXDPLSRXLXPPPXXXKTXXXXXXPXPXHXTPXXXXAPP*TRX*PPXKPPXIP 717
P PPP P + APP PP PP P
Sbjct: 349 PPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPPPP 406
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 546 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 605
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 606 PPPPPSGQPPPPPSGPLP 623
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 421 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 480
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 481 PPPPPSGQPPPPPSGPLP 498
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 32.3 bits (70), Expect = 3.5
Identities = 28/104 (26%), Positives = 28/104 (26%), Gaps = 2/104 (1%)
Frame = +1
Query: 403 LXGPPXSXXPXPPXXHXP--PFSXXXLXPXXXSXXPPXXXXXLXPXPPXXQXTXRXDPLS 576
L GPP PP P PF L P PP P PP Q P
Sbjct: 190 LAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP-- 247
Query: 577 RXLXPPPXXXKTXXXXXXPXPXHXTPXXXXAPP*TRX*PPXKPP 708
P P P P P PP P PP
Sbjct: 248 GPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 291
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +3
Query: 927 PPXTXSXPPXXPXXXPKXPXXHXXXPXYXXXXVPXIXSXXPXXHXPIXSXSPXPXALRXE 1106
PP PP P P H P + S H P P +
Sbjct: 47 PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP 106
Query: 1107 KXXKXXSXPPPPASXPXP 1160
PPPP S P P
Sbjct: 107 PPPPPSGQPPPPPSGPLP 124
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.1 bits (67), Expect = 8.0
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +2
Query: 422 QXXXPPPXXTXPPSPQXPXXXXXYXXXPPXPXXFXXPXHXXXKXXPEXTPSQXPSXXXPX 601
Q PPP + PP P P PP P P P P PS P
Sbjct: 290 QKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGP--PLPPPPPPPPPLPPPSSAGPP 347
Query: 602 P 604
P
Sbjct: 348 P 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,838,481
Number of Sequences: 237096
Number of extensions: 1348416
Number of successful extensions: 6300
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5394
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16293684080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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