Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J17
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 165 3e-41
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 142 3e-34
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 139 3e-33
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 139 3e-33
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 116 3e-26
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 108 6e-24
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 83 4e-16
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 72 5e-13
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 64 1e-10
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 52 4e-07
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 48 1e-05
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 48 1e-05
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 41 0.001
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 41 0.001
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 38 0.008
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 38 0.008
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 38 0.008
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 35 0.071
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 35 0.071
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 34 0.12
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 32 0.66
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 32 0.66
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 32 0.66
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 31 1.2
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 31 1.2
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 31 1.2
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical pr... 30 2.0
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 30 2.0
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 30 2.0
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 30 2.0
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 29 3.5
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 29 3.5
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 29 4.7
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 29 4.7
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 28 8.2
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 28 8.2
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 28 8.2
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 28 8.2
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 165 bits (402), Expect = 3e-41
Identities = 87/140 (62%), Positives = 90/140 (64%)
Frame = +2
Query: 287 MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLM 466
MGK LSKIFG KE+RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN+
Sbjct: 1 MGKFLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFN 60
Query: 467 SGDVXGXDKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXXXLXF 646
DV G DKIRPLW HYY GTQ LIFV+ A EL L F
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVF 120
Query: 647 PNNXIYLTPMKPPEKQKKLG 706
N MKP E Q KLG
Sbjct: 121 ANKQDLADAMKPHEIQDKLG 140
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 142 bits (344), Expect = 3e-34
Identities = 74/139 (53%), Positives = 83/139 (59%)
Frame = +2
Query: 290 GKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMS 469
G L +FG +EMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN++
Sbjct: 6 GSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
Query: 470 GDVXGXDKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXXXLXFP 649
DV G DKIRPLW HY+ TQGLIFVV A +EL L F
Sbjct: 66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFA 125
Query: 650 NNXIYLTPMKPPEKQKKLG 706
N M E KLG
Sbjct: 126 NKQDLPQAMNAAEVTDKLG 144
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 139 bits (336), Expect = 3e-33
Identities = 75/168 (44%), Positives = 95/168 (56%)
Frame = +2
Query: 281 VNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVN 460
+ + L +++FG +++RILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN++
Sbjct: 3 LTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 461 LMSGDVXGXDKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXXXL 640
DV G DKIRPLW HY+ TQGLIFVV + +EL L
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLL 122
Query: 641 XFPNNXIYLTPMKPPEKQKKLGAXPHPGPELVTFXRLAPKTGXGMYKG 784
F N M E KLG + A + G G+Y+G
Sbjct: 123 VFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQ-GHGLYEG 169
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 139 bits (336), Expect = 3e-33
Identities = 75/168 (44%), Positives = 95/168 (56%)
Frame = +2
Query: 281 VNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVN 460
+ + L +++FG +++RILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN++
Sbjct: 3 LTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 461 LMSGDVXGXDKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXXXL 640
DV G DKIRPLW HY+ TQGLIFVV + +EL L
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLL 122
Query: 641 XFPNNXIYLTPMKPPEKQKKLGAXPHPGPELVTFXRLAPKTGXGMYKG 784
F N M E KLG + A + G G+Y+G
Sbjct: 123 VFANKQDLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQ-GHGLYEG 169
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 116 bits (278), Expect = 3e-26
Identities = 68/164 (41%), Positives = 84/164 (51%)
Frame = +2
Query: 293 KLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMSG 472
K+ S +F N E R LMLGLD AGKTTILYKLKL ++V TIPT+GFNVETVT++ + L
Sbjct: 7 KISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVW 66
Query: 473 DVXGXDKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXXXLXFPN 652
DV G KIR LW +Y+P T L+FVV A +EL L F N
Sbjct: 67 DVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFAN 126
Query: 653 NXIYLTPMKPPEKQKKLGAXPHPGPELVTFXRLAPKTGXGMYKG 784
P E + L E A +G G+Y+G
Sbjct: 127 KQDMPNARSPAELTQLLDLGSLKNREWFICGTNA-HSGQGLYEG 169
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 108 bits (259), Expect = 6e-24
Identities = 51/96 (53%), Positives = 64/96 (66%)
Frame = +2
Query: 308 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMSGDVXGX 487
+FG +EMRIL+LGLD AGKTTILY+L++G+ VTTIPT+GFNVE V YKN+ D+ G
Sbjct: 11 LFGAREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQ 70
Query: 488 DKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQEL 595
IRP W YY T +I+VV + QEL
Sbjct: 71 TSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQEL 106
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 82.6 bits (195), Expect = 4e-16
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 323 EMRILMLGLDAAGKTTILYKLKLGQSVTTI---PTVGFNVETVTYKNVNLMSGDVXGXDK 493
E R+++LGLD AGKT+I+ +LK Q T + PT+GFN+ET+ YKN L DV G K
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPK 428
Query: 494 IRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQEL 595
+R LW HYY Q + +V+ A +EL
Sbjct: 429 LRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKEL 462
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 77.4 bits (182), Expect = 1e-14
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Frame = +2
Query: 287 MGKLLSKIFGN----KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN 454
MG +++K+F + K+ +I+++GLD AGKTTILY V T PT+G NVE V+Y+N
Sbjct: 1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRN 60
Query: 455 VNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXX 634
++ + D+ G + +R W YY T +I V+ ++L
Sbjct: 61 LDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAH 120
Query: 635 XLXFPNNXIYLTPMKPPEKQKKLG 706
L N M P E +LG
Sbjct: 121 ILVLANKQDLPGAMNPAEVSTQLG 144
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 72.1 bits (169), Expect = 5e-13
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +2
Query: 320 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMSGDVXGXDKIR 499
+EMRIL+LGLD AGKTT++ K + T PT+GF+++TV +K+ L DV G +R
Sbjct: 15 REMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLR 74
Query: 500 PLWXHYYPGTQGLIFVV 550
W +Y+ T LI+VV
Sbjct: 75 SYWKNYFESTDALIWVV 91
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 70.9 bits (166), Expect = 1e-12
Identities = 46/129 (35%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = +2
Query: 320 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV-TYKNVNLMSGDVXGXDKI 496
+E+RIL+LGLD AGKTTIL +L PT GFNV+TV ++ L D+ G I
Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSI 75
Query: 497 RPLWXHYYPGTQGLIFVVXXXXXXXXXXAPQELXXXXXXXXXXXXXXLXFPNNXIYLTPM 676
RP W +YY LIFV+ EL L F N +T
Sbjct: 76 RPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAA 135
Query: 677 KPPEKQKKL 703
E +KL
Sbjct: 136 SSEEITRKL 144
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 299 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVNLMSGD 475
+ +F +EM + ++GL +GKTT + + GQ + IPTVGFN+ +T NV + D
Sbjct: 12 IRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWD 71
Query: 476 VXGXDKIRPLWXHYYPGTQGLIFVV 550
+ G + R +W Y G ++F+V
Sbjct: 72 IGGQPRFRSMWERYCRGVNAIVFMV 96
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 64.1 bits (149), Expect = 1e-10
Identities = 35/88 (39%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +2
Query: 299 LSKIFG--NKEMRILMLGLDAAGKTTILYKLKLGQ--SVTTIPTVGFNVETVTYKNVNLM 466
LS +FG K++ I+++GLD +GKTTIL +LK + S +PTVG V + +N++
Sbjct: 7 LSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFH 66
Query: 467 SGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
+ D+ G K R W Y+ +QG+IFV+
Sbjct: 67 AFDMAGQMKYRSTWESYFHSSQGVIFVL 94
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 299 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVNLMSGD 475
+ +F +EM + ++GL +GKTT + + GQ + IPTVGFN+ +T NV + D
Sbjct: 12 IRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWD 71
Query: 476 VXGXDKIRPLWXHYYPGTQGLIFVV 550
+ G + R +W Y G ++F+V
Sbjct: 72 IGGQPRFRSMWERYCRGVNAIVFMV 96
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 56.0 bits (129), Expect = 4e-08
Identities = 24/78 (30%), Positives = 46/78 (58%)
Frame = +2
Query: 317 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMSGDVXGXDKI 496
NK+ +++ LGLD AGKTT+L+ LK + +PT+ E ++ ++ + D+ G +
Sbjct: 19 NKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQA 78
Query: 497 RPLWXHYYPGTQGLIFVV 550
R +W Y+P ++F++
Sbjct: 79 RRVWKDYFPAVDAVVFLI 96
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Frame = +2
Query: 305 KIFGNKEMRILMLGLDAAGKTTILYKLK---------LGQSVTTIPTVGFNVETVTYKNV 457
K F K+ ++++GLD AGKTT L + K L S T TVG N V N
Sbjct: 11 KFFKKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITA-TVGLNTGNVELNNT 69
Query: 458 NLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
L D+ G + +R LW YY +IFVV
Sbjct: 70 CLHFWDLGGQESLRELWATYYDDANAMIFVV 100
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 320 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-KNVNLMSGDVXGXDKI 496
+E+++ G+ +AGKTT L LK + T GF+ + Y + +L DV G I
Sbjct: 23 REIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGI 82
Query: 497 RPLWXHYYPGTQGLIFVV 550
R +W +YY G+I+V+
Sbjct: 83 RGIWSNYYAEVHGIIYVI 100
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 320 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-KNVNLMSGDVXGXDKI 496
+E+++ G+ +AGKTT L LK + T GF+ + Y + +L DV G I
Sbjct: 23 REIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGI 82
Query: 497 RPLWXHYYPGTQGLIFVV 550
R +W +YY G+I+V+
Sbjct: 83 RGIWSNYYAEVHGIIYVI 100
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 329 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVNLMSGDVXGXDK 493
++L++G GKT ILY+ TT I T+G F ++T+ K + L D G ++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 494 IRPLWXHYYPGTQGLIFV 547
+ YY G G++ V
Sbjct: 71 FHTITTSYYRGAMGIMLV 88
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 329 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVNLMSGDVXGXDK 493
++L++G GKT ILY+ TT I T+G F ++T+ K + L D G ++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 494 IRPLWXHYYPGTQGLIFV 547
+ YY G G++ V
Sbjct: 71 FHTITTSYYRGAMGIMLV 88
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 329 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVNLMSGDVXGXDK 493
++L++G GKT +L++ + + I T+G F + T+ K + L D G ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 494 IRPLWXHYYPGTQGLIFV 547
R + YY G G+I V
Sbjct: 70 FRTITTAYYRGAMGIILV 87
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 329 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVNLMSGDVXGXDK 493
++L++G GKT +L++ + + I T+G F + T+ K + L D G ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 494 IRPLWXHYYPGTQGLIFV 547
R + YY G G+I V
Sbjct: 70 FRTITTAYYRGAMGIILV 87
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 329 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVNLMSGDVXGXDK 493
++L++G GKT +L++ + + I T+G F + T+ K + L D G ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 494 IRPLWXHYYPGTQGLIFV 547
R + YY G G+I V
Sbjct: 70 FRTITTAYYRGAMGIILV 87
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 35.1 bits (77), Expect = 0.071
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 326 MRILMLGLDAAGKTTILYKLKLGQSVTT--IPTVGFNVE----TVTYKNVNLMSGDVXGX 487
+++++LG GKT +L + K G + I TVG + T+ K V L D G
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 488 DKIRPLWXHYYPGTQGLIFV 547
++ R + YY L+ V
Sbjct: 63 ERFRSVTTSYYRDADALLLV 82
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 35.1 bits (77), Expect = 0.071
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +2
Query: 326 MRILMLGLDAAGKTTILYKLKLGQSVTT--IPTVGFNVE----TVTYKNVNLMSGDVXGX 487
+++++LG GKT +L + K G + I TVG + T+ K V L D G
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 488 DKIRPLWXHYYPGTQGLIFV 547
++ R + YY L+ V
Sbjct: 63 ERFRSVTTSYYRDADALLLV 82
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 34.3 bits (75), Expect = 0.12
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +2
Query: 329 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVNLMSGDVXGXDK 493
++L++G GK+ +L + + I T+G F + T+ K + L D G ++
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 494 IRPLWXHYYPGTQGLIFV 547
R + YY G G+I V
Sbjct: 73 FRTITSSYYRGAHGIIVV 90
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 404 TTIPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T + T G T+KN+N DV G R W H + +IF V
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 404 TTIPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T + T G T+KN+N DV G R W H + +IF V
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 31.9 bits (69), Expect = 0.66
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 404 TTIPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T + T G T+KN+N DV G R W H + +IF V
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
+PT G V N+ LM D G R W H++ ++FV
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFV 227
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
+PT G V N+ LM D G R W H++ ++FV
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFV 227
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Frame = +2
Query: 326 MRILMLGLDAAGKTTILYKLKLG----QSVTTIPTVGFNVETVTY--KNVNLMSGDVXGX 487
++IL++G GK++++ + + TI V F V ++ V L D G
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIG-VDFRVTSMAIDGNRVKLAIWDTAGQ 70
Query: 488 DKIRPLWXHYYPGTQGLIFV 547
++ R L YY G QG+I V
Sbjct: 71 ERFRTLTPSYYRGAQGVICV 90
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
IPT+G +T+ K DV G R W H + IF+
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
I T G N YK ++ DV G R W H + ++F+V
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDNVDMILFIV 236
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
+PT G + KN N DV G R W H + Q ++F+
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFI 235
>Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical
protein C07E3.8 protein.
Length = 294
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 228 IPLCWLVATILSHWWLLILTACNT*PHDNRKLQXS 124
IP +L A ++S W LLIL C P+ +LQ S
Sbjct: 175 IPKVFLSAMMISKWKLLILKTCEDSPYAMEELQLS 209
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
IPT+G +T+ K DV G R W H + IF+
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
+PT G + KN N DV G R W H + Q ++F+
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFI 235
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
I T G N YK ++ DV G R W H + ++F+V
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDNVDMILFIV 236
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
+PT G +K +L DV G + W H + G++F+
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 410 IPTVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFV 547
+PT G +K +L DV G + W H + G++F+
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +2
Query: 317 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMSGDVXGXDKI 496
N++ IL+LG+ +GKTT + +L P N++ K ++ D+ K
Sbjct: 28 NQKPSILVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKY 87
Query: 497 RPLWXHYYPGTQGLI 541
+ + + G G I
Sbjct: 88 KEVMKEFGMGPNGAI 102
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = +2
Query: 317 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVNLMSGDVXGXDKI 496
N++ IL+LG+ +GKTT + +L P N++ K ++ D+ K
Sbjct: 28 NQKPSILVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSKVPYPVNVDIRDTVKY 87
Query: 497 RPLWXHYYPGTQGLI 541
+ + + G G I
Sbjct: 88 KEVMKEFGMGPNGAI 102
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +2
Query: 272 GKLVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKL--KLGQSVTTIPTVGFNVE--- 436
G L + +L + + R+L +GL GKTTI +L K + TT T VE
Sbjct: 21 GLLTVLLLVLKSFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKI 80
Query: 437 TVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T+ K+ D G D++R + ++ L+ +V
Sbjct: 81 TLRIKDKEKEIIDYPGNDRLRQKLIENHLHSRSLLRIV 118
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 416 TVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T+ N Y V+L+ DV G R W H + + ++FV+
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVI 226
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 416 TVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T+ N Y V+L+ DV G R W H + + ++FV+
Sbjct: 222 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVI 266
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 416 TVGFNVETVTYKNVNLMSGDVXGXDKIRPLWXHYYPGTQGLIFVV 550
T+ N Y V+L+ DV G R W H + + ++FV+
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFDDAKVVLFVI 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,258,113
Number of Sequences: 27780
Number of extensions: 328934
Number of successful extensions: 882
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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