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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J16
         (923 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    35   0.019
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces...    34   0.033
SPBC13A2.01c |||nuclear cap-binding complex small subunit|Schizo...    30   0.53 
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb...    29   0.70 
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    29   0.93 
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra...    28   1.6  
SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr 2...    28   1.6  
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual      28   2.1  
SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|ch...    28   2.1  
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    27   2.8  
SPBC29A10.14 |rec8||meiotic cohesin complex subunit Rec8|Schizos...    27   3.7  
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa...    27   3.7  
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma...    27   3.7  
SPAC4G8.07c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual          27   4.9  
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||...    26   6.5  
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|...    26   6.5  
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam...    26   8.6  
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces...    26   8.6  
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl...    26   8.6  
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy...    26   8.6  
SPAC2F7.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    26   8.6  

>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 34.7 bits (76), Expect = 0.019
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
 Frame = -1

Query: 899 LSXSSRXXETVTRNPLMRSSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCANS 720
           L+ SS    ++  + +  SS +S +  S+   S + T   L     NS   AT    A S
Sbjct: 119 LASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATS 178

Query: 719 RRT*SVLAS*GTPTSTAVSAR-----DSTATESACPSTTAPCSDSAFSRLSLFLNST 564
               S  AS    +S+  S+       +TAT S+  ST A  S ++ S  S  LNST
Sbjct: 179 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNST 235



 Score = 28.3 bits (60), Expect = 1.6
 Identities = 31/115 (26%), Positives = 54/115 (46%)
 Frame = -1

Query: 902 LLSXSSRXXETVTRNPLMRSSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCAN 723
           L S +S    + +  PL  ++ ++  + S+ + S+N +      VL  S + +T    AN
Sbjct: 375 LTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSS-----VLPTSSVSSTPLSSAN 429

Query: 722 SRRT*SVLAS*GTPTSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIA 558
           S  T +  AS  TP S+  S   ++A+ +   S  +  + SA S     +NST A
Sbjct: 430 S--TTATSAS-STPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTA 481



 Score = 28.3 bits (60), Expect = 1.6
 Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
 Frame = -1

Query: 902 LLSXSSRXXETVTRNPLMR-SSRSSFNAFSTDSLSWNVTRKILY----LVLLNSWMCATS 738
           L S +S    + +  PL   +S ++ +A ST   S N T         L   NS    + 
Sbjct: 457 LSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSV 516

Query: 737 PQCANSRRT*SVLAS*GTPTSTAVSARDSTATESACPSTTAPCSDSAFSRLSL-FLNSTI 561
              A S  T SVL +    ++   SA  +TAT ++    T+  S +A S  S  F NSTI
Sbjct: 517 SSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSASSTPFGNSTI 576

Query: 560 ADN 552
             +
Sbjct: 577 TSS 579



 Score = 27.9 bits (59), Expect = 2.1
 Identities = 26/92 (28%), Positives = 47/92 (51%)
 Frame = -1

Query: 890 SSRXXETVTRNPLMRSSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCANSRRT 711
           SS    ++T +    SS +S ++ ++ S +   +       L +S   ATS   A+S  T
Sbjct: 68  SSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSS--SATSSSLASSSTT 125

Query: 710 *SVLAS*GTPTSTAVSARDSTATESACPSTTA 615
            S LAS  + TS+++++   T++  A  STT+
Sbjct: 126 SSSLAS-SSITSSSLASSSITSSSLASSSTTS 156



 Score = 26.2 bits (55), Expect = 6.5
 Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
 Frame = -1

Query: 845 SSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMC--ATSPQCANSRRT*SVLAS*GTPTST 672
           S+ SS   ++T SL  + T     L   NS     A+S    +   T +  AS  TP S+
Sbjct: 268 SATSSSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSAS-STPLSS 326

Query: 671 AVSARDSTATE-SACP--STTAPCSDSAFSRLSLFLNSTIA 558
             SA  +TAT  S+ P  S  +  + SA S     +NST A
Sbjct: 327 VSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTA 367


>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 609

 Score = 33.9 bits (74), Expect = 0.033
 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +1

Query: 415 LLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLE 594
           + V NLPS+       +L E F    + + + R     T+ + +PTL A + F+NK S +
Sbjct: 22  IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTD-SKSPTLFAFITFENKCSAD 80

Query: 595 KAL-SEHGAVVEGHALSV 645
            A+ S +G+  +G+ L V
Sbjct: 81  NAIASLNGSSFQGNTLKV 98


>SPBC13A2.01c |||nuclear cap-binding complex small
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 182

 Score = 29.9 bits (64), Expect = 0.53
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVE-FKNKDSLE 594
           +E++  LFSK GEI  +  G   V   T TP     VE F+N+D+L+
Sbjct: 45  EEQIYALFSKCGEIRRIIMG---VDRFTKTPCGFCFVEYFENQDALD 88


>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 262

 Score = 29.5 bits (63), Expect = 0.70
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = -1

Query: 680 TSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSS 531
           +++A S   STAT S+  +T++  S S+ + +S  + S+I+ +    VSS
Sbjct: 136 STSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSS 185


>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 3971

 Score = 29.1 bits (62), Expect = 0.93
 Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
 Frame = -1

Query: 857 PLMRSSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCANSRR--T*SVLAS*GT 684
           P+  SS  + +   T S   N +  I    +LNS    TS    NS    T S + +  T
Sbjct: 383 PITSSSVLNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSST 442

Query: 683 P--TSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSSVTMIGPR 510
           P  +STA++      + S   S+T   S S  +  +   +ST+  N    ++S T++   
Sbjct: 443 PITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVV-NTSTPITSSTVVNSS 501

Query: 509 LTVLISPCFENNS 471
             +  S     ++
Sbjct: 502 TPITSSTALNTST 514



 Score = 25.8 bits (54), Expect = 8.6
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
 Frame = -1

Query: 857  PLMRSSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCANSRR--T*SVLAS*GT 684
            P+  S+  + +   T S   N +  I     LN+    TS    NS    T S + +  T
Sbjct: 1847 PITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 1906

Query: 683  P--TSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSS 531
            P  +STA++      + S   S+T   S S  +  +   +ST+ ++   + SS
Sbjct: 1907 PITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSS 1959



 Score = 25.8 bits (54), Expect = 8.6
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
 Frame = -1

Query: 857  PLMRSSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCANSRR--T*SVLAS*GT 684
            P+  S+  + +   T S   N +  I     LN+    TS    NS    T S + +  T
Sbjct: 2039 PITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSST 2098

Query: 683  P--TSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSS 531
            P  +STA++      + S   S+T   S S  +  +   +ST+ ++   + SS
Sbjct: 2099 PITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSS 2151


>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
           transcription Rct1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 432

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = +1

Query: 460 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKA 600
           E L+ +FS+ G+I + +    ++ +  T  +L  A +EF NK+S+EKA
Sbjct: 258 EDLELIFSRFGKIISCQ----VIRDKETGDSLQYAFIEFDNKESVEKA 301


>SPBC19F5.04 |||aspartate kinase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 519

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
 Frame = -3

Query: 909 IXASVVFVAXXGDGDEEPVDAELA--VQLQRLLDGLLVV-ECHPQ--DLVLGLAELVDVR 745
           + A+  F+   G  DE  +DA  A  V+L++ L+ + V+ E  P+  DLV+G+ E +  R
Sbjct: 93  VQAARDFIQDVGIQDEL-IDAFHADCVELEQYLNAIRVLSEVSPRTRDLVIGMGERLSCR 151

Query: 744 HVAAVREQQ 718
            +AAV + Q
Sbjct: 152 FMAAVLKDQ 160


>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 166

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 18/65 (27%), Positives = 28/65 (43%)
 Frame = +1

Query: 451 DYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKALSEHGAVVEG 630
           DY    +EL S      +V R  I+  + T  P   A +EF     +  AL  +G+++  
Sbjct: 63  DYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNALLLNGSMLHE 122

Query: 631 HALSV 645
             L V
Sbjct: 123 RPLKV 127


>SPAC3C7.04 |||transcription factor |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 783

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
 Frame = +1

Query: 493 EINTVKRGPIIVTELTTTPTLSAIVEFK--NKDSLEKALSEHGAVVEGHALSVAVESRAE 666
           +++T+ +G ++ +++   PT+ A       N D+ ++++ E   ++      + V+S  E
Sbjct: 144 DVDTLTQGALVCSQIQQDPTVVAEDTNNGINADASDQSVDEIMKLIG----KIKVDSNGE 199

Query: 667 TAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKLDREL 846
           +  +     EA  D V+         + +  +S T +       HD  +V+KAL L    
Sbjct: 200 SRYIGASAGEAFVDSVQSELLVDPSFSELSAYSHTHHSY-PPNEHDVNAVQKALSLLPPP 258

Query: 847 RINGFLV 867
            ++ FL+
Sbjct: 259 EVSDFLI 265


>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 155 PKRKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSMETTES 298
           PK+   E K R  +P P K S+KKQK ++K K   +   +    ++ES
Sbjct: 51  PKKSKKEAK-RASSPEPSKKSVKKQK-KSKKKEESSSESESESSSSES 96


>SPBC29A10.14 |rec8||meiotic cohesin complex subunit
           Rec8|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 561

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +2

Query: 191 PNPSPLKMSLKKQKFQNKPKRTMAYRIKLSMETTESLLKALRTLMSLRR 337
           P P PL+  +  +  +N+P+     +++  +E  E++  + RTL   R+
Sbjct: 262 PLPVPLQSVMDSEHNENEPRALKRRKVQKLLEPDENIELSTRTLSQWRK 310


>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
           Msa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 533

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
 Frame = +1

Query: 559 AIVEFKNKDSLEKALSE-HGAVVEGHALSV---AVESRAETAVLVGVPYEASTDYVRLLF 726
           + V+F+N D   KALSE    +++G  + +    V      +     PY    D   LL 
Sbjct: 124 SFVQFQNTDDASKALSEAQNTILDGRHIRIERAKVNRTIRISSAPHQPYITKKDIDNLLE 183

Query: 727 AHCGDVAHIHEFSKTKYKILRVTFHDK 807
            + G+V  + E       ++R  + D+
Sbjct: 184 PY-GEVEDVTEIPDQSAFLVRFVYRDE 209


>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 358

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = -1

Query: 683 PTSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSSVT 525
           PTS+++ +  +  T S  P+T++  + S     S+  NSTI  +  +  S++T
Sbjct: 104 PTSSSILSNSTIPTTSPVPTTSSTPTSS-----SILSNSTIPSSSSISASTIT 151


>SPAC4G8.07c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 527

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +1

Query: 544 TPTLSAIVEFKNKDSLEKALSEHGAVVE----GHALSVAVESRAETAVLVGVPYE 696
           T  +S+I E  NK + + +       VE    GH L + +E+  E  VL  VP+E
Sbjct: 55  TRAISSISEAANKRARKLSKRRAKKPVEEGSSGHVLLLEIENLIEKPVLANVPFE 109


>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 534

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 20/94 (21%), Positives = 49/94 (52%)
 Frame = -1

Query: 746 ATSPQCANSRRT*SVLAS*GTPTSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNS 567
           ++S    +S  + S ++S  + +S+  S+  + ++ S+ PS+++  S ++ S+ S   +S
Sbjct: 311 SSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSS 370

Query: 566 TIADNVGVVVSSVTMIGPRLTVLISPCFENNSLS 465
           T++ +     S++T      +   S    ++SLS
Sbjct: 371 TVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLS 404


>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 530

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = -1

Query: 671 AVSARDSTATESACPSTTAP-CSDSAFSRLSLFLNSTI--ADNVGVVVSSVTMI 519
           A +A  +T+TES   +T+AP  S SA S  + F+++ +   DNV   V S T +
Sbjct: 78  ASTALPTTSTESVVVTTSAPAASSSATSYPATFVSTPLYTMDNVTAPVWSNTSV 131


>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
           Mam3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1082

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 27/83 (32%), Positives = 42/83 (50%)
 Frame = -1

Query: 845 SSRSSFNAFSTDSLSWNVTRKILYLVLLNSWMCATSPQCANSRRT*SVLAS*GTPTSTAV 666
           ++ +S N  ST +   +  + +   V L+     TS    +S  + SV+ S   PT TAV
Sbjct: 96  NNAASSNPTSTVTEYVDRVQTVTEYVTLSCGQAFTSTVDISSSTSSSVINS---PTGTAV 152

Query: 665 SARDSTATESACPSTTAPCSDSA 597
           S++ ST + S  PS+T   S SA
Sbjct: 153 SSQISTLSMS--PSSTPVFSPSA 173


>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 857

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +1

Query: 427 NLPSSYLFDYQEKLKELFSKH---GEINTVKRGPIIVT 531
           N P S L DYQ K+ E  S      E+NT++  P  V+
Sbjct: 255 NTPESLLIDYQSKIPEDLSSSLLPLELNTLQSTPTSVS 292


>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 557

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 155 PKRKVAELKLRQPNPS---PLKMSLKKQKFQNKPKRTMAYRIKLSMETTES 298
           PKR+  E+K   P P+   P+K S     ++ +P R +  R  L ++  +S
Sbjct: 316 PKRRPIEVKPAAPVPTPAPPVKTSPHPASYRPQPTRNVEVRPLLMLDDVQS 366


>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 385

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = -1

Query: 686 TPTSTAVSARDSTATE---SACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSS 531
           T    ++S+  ST++E   S+ P TT   SDS     S  ++++ +    V+VSS
Sbjct: 74  TSGQLSISSSSSTSSEYSSSSIPITTVSSSDSFIPSSSQTISASSSTTDNVIVSS 128


>SPAC2F7.09c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 491

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 623 TTAPCSDSAFSRLSLFLNSTIADNVGVVVSSVTMIGPRLTVLISP 489
           T  P   ++ ++L    NST  DNV +V  S + +    TV I P
Sbjct: 389 TKLPAHITSITKLQSLENSTKNDNVPLVTHSPSPMHSSFTVSIKP 433


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,706,706
Number of Sequences: 5004
Number of extensions: 45364
Number of successful extensions: 200
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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