Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J16
(923 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 41 0.006
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 41 0.006
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 41 0.006
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 41 0.006
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 41 0.006
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 41 0.006
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 34 0.63
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 34 0.63
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 34 0.63
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 33 1.1
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 33 1.1
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 33 1.1
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 33 1.1
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 33 1.1
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 33 1.1
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 33 1.1
EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-relate... 32 2.6
BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein. 32 2.6
AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing ... 32 2.6
AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein. 32 2.6
AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein. 32 2.6
AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein. 32 2.6
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 32 2.6
AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens ... 32 2.6
U94352-1|AAC51358.1| 321|Homo sapiens manic fringe precursor pr... 31 4.5
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 5.9
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 5.9
Z93096-1|CAB07511.1| 321|Homo sapiens manic fringe homolog (Dro... 31 7.8
CR456518-1|CAG30404.1| 321|Homo sapiens MFNG protein. 31 7.8
BC094814-1|AAH94814.1| 321|Homo sapiens MFNG O-fucosylpeptide 3... 31 7.8
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 31 7.8
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 31 7.8
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 31 7.8
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 31 7.8
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 31 7.8
>BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif protein
34 protein.
Length = 425
Score = 41.1 bits (92), Expect = 0.006
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAI--------------VEFKNKDSLE 594
++KLK F ++G+I +V+ +I E T + L+AI V FK + +
Sbjct: 193 KKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAAT 252
Query: 595 KALSEHGA-VVEGHALSV----AVESRAETAVLVG-VPYEASTDYVRLLFAHCGDVAHIH 756
+AL +GA + +G + V SR + +V VG +PY+ + F CG + +
Sbjct: 253 QALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVR 312
Query: 757 EFSKTKYKILR----VTFHDKESVEKALKLD 837
I + V F + +SV ALKL+
Sbjct: 313 IVRDKMTGIGKGFGYVLFENTDSVHLALKLN 343
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 41.1 bits (92), Expect = 0.006
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +1
Query: 286 DDGIAAEGAENADESTEGDQNQENPDGXXXXXXXXXXXXXXGKLLVENLPSSYLFDY-QE 462
D+ EGA+N+ E ++ +E + L ++NL FD +E
Sbjct: 698 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCT---------LFIKNLN----FDTTEE 744
Query: 463 KLKELFSKHGEINTVKRGPIIVTELTTTPTLS---AIVEFKNKDSLEKALSE-HGAVVEG 630
KLKE+FSK + TVK I + LS VE++ + +KAL + G VV+G
Sbjct: 745 KLKEVFSK---VGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 801
Query: 631 HALSVAVESRA 663
H L V + RA
Sbjct: 802 HKLEVRISERA 812
Score = 35.5 bits (78), Expect = 0.27
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 409 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDS 588
G+L V NLP + +E L++LFSK+G ++ + PI LT P A + F +
Sbjct: 402 GRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFPEH 455
Query: 589 LEKALSE-HGAVVEGHALSV 645
KA SE G V +G L V
Sbjct: 456 AVKAYSEVDGQVFQGRMLHV 475
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 41.1 bits (92), Expect = 0.006
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +1
Query: 286 DDGIAAEGAENADESTEGDQNQENPDGXXXXXXXXXXXXXXGKLLVENLPSSYLFDY-QE 462
D+ EGA+N+ E ++ +E + L ++NL FD +E
Sbjct: 698 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCT---------LFIKNLN----FDTTEE 744
Query: 463 KLKELFSKHGEINTVKRGPIIVTELTTTPTLS---AIVEFKNKDSLEKALSE-HGAVVEG 630
KLKE+FSK + TVK I + LS VE++ + +KAL + G VV+G
Sbjct: 745 KLKEVFSK---VGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 801
Query: 631 HALSVAVESRA 663
H L V + RA
Sbjct: 802 HKLEVRISERA 812
Score = 35.5 bits (78), Expect = 0.27
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 409 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDS 588
G+L V NLP + +E L++LFSK+G ++ + PI LT P A + F +
Sbjct: 402 GRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFPEH 455
Query: 589 LEKALSE-HGAVVEGHALSV 645
KA SE G V +G L V
Sbjct: 456 AVKAYSEVDGQVFQGRMLHV 475
>AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 41.1 bits (92), Expect = 0.006
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAI--------------VEFKNKDSLE 594
++KLK F ++G+I +V+ +I E T + L+AI V FK + +
Sbjct: 198 KKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAAT 257
Query: 595 KALSEHGA-VVEGHALSV----AVESRAETAVLVG-VPYEASTDYVRLLFAHCGDVAHIH 756
+AL +GA + +G + V SR + +V VG +PY+ + F CG + +
Sbjct: 258 QALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVR 317
Query: 757 EFSKTKYKILR----VTFHDKESVEKALKLD 837
I + V F + +SV ALKL+
Sbjct: 318 IVRDKMTGIGKGFGYVLFENTDSVHLALKLN 348
>AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 41.1 bits (92), Expect = 0.006
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 24/151 (15%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAI--------------VEFKNKDSLE 594
++KLK F ++G+I +V+ +I E T + L+AI V FK + +
Sbjct: 198 KKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAAT 257
Query: 595 KALSEHGA-VVEGHALSV----AVESRAETAVLVG-VPYEASTDYVRLLFAHCGDVAHIH 756
+AL +GA + +G + V SR + +V VG +PY+ + F CG + +
Sbjct: 258 QALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVR 317
Query: 757 EFSKTKYKILR----VTFHDKESVEKALKLD 837
I + V F + +SV ALKL+
Sbjct: 318 IVRDKMTGIGKGFGYVLFENTDSVHLALKLN 348
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 41.1 bits (92), Expect = 0.006
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +1
Query: 286 DDGIAAEGAENADESTEGDQNQENPDGXXXXXXXXXXXXXXGKLLVENLPSSYLFDY-QE 462
D+ EGA+N+ E ++ +E + L ++NL FD +E
Sbjct: 711 DENPTEEGADNSSAKMEEEEEEEEEEEESLPGCT---------LFIKNLN----FDTTEE 757
Query: 463 KLKELFSKHGEINTVKRGPIIVTELTTTPTLS---AIVEFKNKDSLEKALSE-HGAVVEG 630
KLKE+FSK + TVK I + LS VE++ + +KAL + G VV+G
Sbjct: 758 KLKEVFSK---VGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDG 814
Query: 631 HALSVAVESRA 663
H L V + RA
Sbjct: 815 HKLEVRISERA 825
Score = 35.5 bits (78), Expect = 0.27
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 409 GKLLVENLPSSYLFDYQEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDS 588
G+L V NLP + +E L++LFSK+G ++ + PI LT P A + F +
Sbjct: 415 GRLFVRNLPYT---STEEDLEKLFSKYGPLSEL-HYPI--DSLTKKPKGFAFITFMFPEH 468
Query: 589 LEKALSE-HGAVVEGHALSV 645
KA SE G V +G L V
Sbjct: 469 AVKAYSEVDGQVFQGRMLHV 488
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 34.3 bits (75), Expect = 0.63
Identities = 26/123 (21%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +1
Query: 565 VEFKNKDSLEKALSEHGAVVEGHALSV--------AVESRAETAVLVGVPYEASTDYVRL 720
V+F++ + LEKAL G V G+ + + E A T + +PY+ + D ++
Sbjct: 352 VDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKE 411
Query: 721 LFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKLDRELRINGFLVTVSXXRDEXDR 900
+F ++ + + K+K I + F + EK + + I+G +++ ++
Sbjct: 412 VFEDAAEIRLVSKDGKSK-GIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQN 470
Query: 901 SSY 909
Y
Sbjct: 471 QDY 473
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 34.3 bits (75), Expect = 0.63
Identities = 26/123 (21%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +1
Query: 565 VEFKNKDSLEKALSEHGAVVEGHALSV--------AVESRAETAVLVGVPYEASTDYVRL 720
V+F++ + LEKAL G V G+ + + E A T + +PY+ + D ++
Sbjct: 329 VDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKE 388
Query: 721 LFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKLDRELRINGFLVTVSXXRDEXDR 900
+F ++ + + K+K I + F + EK + + I+G +++ ++
Sbjct: 389 VFEDAAEIRLVSKDGKSK-GIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQN 447
Query: 901 SSY 909
Y
Sbjct: 448 QDY 450
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 34.3 bits (75), Expect = 0.63
Identities = 26/123 (21%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Frame = +1
Query: 565 VEFKNKDSLEKALSEHGAVVEGHALSV--------AVESRAETAVLVGVPYEASTDYVRL 720
V+F++ + LEKAL G V G+ + + E A T + +PY+ + D ++
Sbjct: 352 VDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKE 411
Query: 721 LFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKLDRELRINGFLVTVSXXRDEXDR 900
+F ++ + + K+K I + F + EK + + I+G +++ ++
Sbjct: 412 VFEDAAEIRLVSKDGKSK-GIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQN 470
Query: 901 SSY 909
Y
Sbjct: 471 QDY 473
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 119
Query: 631 HALSVAVE 654
H + V E
Sbjct: 120 HEIFVDYE 127
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 119
Query: 631 HALSVAVE 654
H + V E
Sbjct: 120 HEIFVDYE 127
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 631 HALSVAVE 654
H + V E
Sbjct: 125 HEIFVDYE 132
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 631 HALSVAVE 654
H + V E
Sbjct: 125 HEIFVDYE 132
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 64 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 119
Query: 631 HALSVAVE 654
H + V E
Sbjct: 120 HEIFVDYE 127
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 631 HALSVAVE 654
H + V E
Sbjct: 125 HEIFVDYE 132
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLS-AIVEFKNKDSLEKALSE-HGAVVEG 630
++KLKE+FS++G+I ++ +V +L T + A +E+K + ++ KA + G V++
Sbjct: 69 EDKLKEVFSRYGDIRRLR----LVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQ 124
Query: 631 HALSVAVE 654
H + V E
Sbjct: 125 HEIFVDYE 132
>EF432052-1|ABO28524.1| 643|Homo sapiens candidate growth-related
and time keeping constitutive hydroquinone (NADH) oxid
protein.
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>BC024178-1|AAH24178.1| 643|Homo sapiens ENOX1 protein protein.
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>AY513282-1|AAT08035.1| 643|Homo sapiens proliferation-inducing
protein 38 protein.
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>AL627430-1|CAH72199.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>AL607148-1|CAH70584.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>AL138823-2|CAI16283.2| 643|Homo sapiens novel protein protein.
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 32.3 bits (70), Expect = 2.6
Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +1
Query: 565 VEFKNKDSLEKALSEHGAVVEGHALSV--------AVESRAETAVLVGVPYEASTDYVRL 720
V+F++ + LEKAL G V G+ + + E A T + +PY+ + D ++
Sbjct: 245 VDFESAEDLEKALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKE 304
Query: 721 LFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKLDRELRINGFLVTVSXXRDEXDR 900
+F ++ + + +K I + F + EK + + I+G +++ ++
Sbjct: 305 VFEDAAEIRLVSKDGNSK-GIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYYTGEKGQN 363
Query: 901 SSY 909
Y
Sbjct: 364 QDY 366
>AK000956-1|BAA91442.1| 643|Homo sapiens protein ( Homo sapiens
cDNA FLJ10094 fis, clone HEMBA1002419. ).
Length = 643
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 664 ETAVLVGVPYEASTDYVRLLFAHCGDVAHIHEFSKTKYKILRVTFHDKESVEKALKL 834
+T + G+P A+ + ++ +F CGD+ I K+K + F ++ V+KA+ L
Sbjct: 142 KTVFVGGLPENATEEIIQEVFEQCGDITAIR---KSKKNFCHIRFAEEFMVDKAIYL 195
>U94352-1|AAC51358.1| 321|Homo sapiens manic fringe precursor
protein.
Length = 321
Score = 31.5 bits (68), Expect = 4.5
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 110 IGIXYLEYHTSSSW*PKRKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTM-AYRIKLSME 286
+G+ L YH + S P+R +L QPNP P K+ L K R R++L ++
Sbjct: 19 MGLLCLRYHLNLS--PQRVQGTPELSQPNPGPPKLQLHDVFIAVKTTRAFHRLRLELLLD 76
Query: 287 TTESLLKAL 313
T S + L
Sbjct: 77 TWVSRTREL 85
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 31.1 bits (67), Expect = 5.9
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 746 ATSPQCANSRRT*SVLAS*GTPTSTAVSARDSTATESACPSTTAPCSDSAF-SRLSLFLN 570
+T+P +N+ T S AS PT+ S ST +E + P T+ P S + S + L+
Sbjct: 3243 STTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLS 3302
Query: 569 STIAD 555
+T AD
Sbjct: 3303 TTPAD 3307
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 31.1 bits (67), Expect = 5.9
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -1
Query: 746 ATSPQCANSRRT*SVLAS*GTPTSTAVSARDSTATESACPSTTAPCSDSAF-SRLSLFLN 570
+T+P +N+ T S AS PT+ S ST +E + P T+ P S + S + L+
Sbjct: 3243 STTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLS 3302
Query: 569 STIAD 555
+T AD
Sbjct: 3303 TTPAD 3307
>Z93096-1|CAB07511.1| 321|Homo sapiens manic fringe homolog
(Drosophila) protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 110 IGIXYLEYHTSSSW*PKRKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 283
+G+ L YH + S P+R +L QPNP P K+ L K R +R++L +
Sbjct: 19 MGLLCLRYHLNLS--PQRVQGTPELSQPNPGPPKLQLHDVFIAVKTTRAF-HRLRLEL 73
>CR456518-1|CAG30404.1| 321|Homo sapiens MFNG protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 110 IGIXYLEYHTSSSW*PKRKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 283
+G+ L YH + S P+R +L QPNP P K+ L K R +R++L +
Sbjct: 19 MGLLCLRYHLNLS--PQRVQGTPELSQPNPGPPKLQLHDVFIAVKTTRAF-HRLRLEL 73
>BC094814-1|AAH94814.1| 321|Homo sapiens MFNG O-fucosylpeptide
3-beta-N-acetylglucosaminyltransferase protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 110 IGIXYLEYHTSSSW*PKRKVAELKLRQPNPSPLKMSLKKQKFQNKPKRTMAYRIKLSM 283
+G+ L YH + S P+R +L QPNP P K+ L K R +R++L +
Sbjct: 19 MGLLCLRYHLNLS--PQRVQGTPELSQPNPGPPKLQLHDVFIAVKTTRAF-HRLRLEL 73
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 460 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 636
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268
Query: 637 LSV 645
L V
Sbjct: 269 LYV 271
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 460 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 636
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 49 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 104
Query: 637 LSV 645
L V
Sbjct: 105 LYV 107
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 460 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 636
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268
Query: 637 LSV 645
L V
Sbjct: 269 LYV 271
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 460 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 636
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 198 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 253
Query: 637 LSV 645
L V
Sbjct: 254 LYV 256
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 30.7 bits (66), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 460 EKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKA-LSEHGAVVEGHA 636
EKLKELF ++G +VK ++ + + V ++ ++ +KA L HG ++G
Sbjct: 213 EKLKELFCEYGPTESVK----VIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKV 268
Query: 637 LSV 645
L V
Sbjct: 269 LYV 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,494,408
Number of Sequences: 237096
Number of extensions: 1545675
Number of successful extensions: 5130
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5101
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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