Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J16
         (923 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical pr...    33   0.29 
Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical pr...    33   0.29 
AC006790-9|AAF60735.1|  382|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ...    30   2.7  
Z81594-1|CAB04745.1|  908|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z70208-11|CAA94144.1|  598|Caenorhabditis elegans Hypothetical p...    29   4.7  
U39646-2|AAA80368.2|  223|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U39646-3|AAA80369.1|  194|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AF026204-3|AAB71253.1|  424|Caenorhabditis elegans Hypothetical ...    29   6.2  
AF077537-11|AAC26280.1|  230|Caenorhabditis elegans Hypothetical...    28   8.2  
AF016669-2|AAB66099.2|  455|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z50110-2|CAA90446.1|  566|Caenorhabditis elegans Hypothetical
           protein F18H3.3b protein.
          Length = 566

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
 Frame = +1

Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKALSE-HGAVVEGH 633
           QEKL  +FSK GEI +     +++T+    P     V F ++D+  +A+ + + +++EG 
Sbjct: 251 QEKLSAMFSKFGEITSA----VVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGT 306

Query: 634 ALSVAV---ESRAETAVLVGVPYEA 699
              ++V   + ++E +  +   YEA
Sbjct: 307 DCKLSVCRAQKKSERSAELKRKYEA 331


>Z50110-1|CAA90444.1|  692|Caenorhabditis elegans Hypothetical
           protein F18H3.3a protein.
          Length = 692

 Score = 33.1 bits (72), Expect = 0.29
 Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
 Frame = +1

Query: 457 QEKLKELFSKHGEINTVKRGPIIVTELTTTPTLSAIVEFKNKDSLEKALSE-HGAVVEGH 633
           QEKL  +FSK GEI +     +++T+    P     V F ++D+  +A+ + + +++EG 
Sbjct: 251 QEKLSAMFSKFGEITSA----VVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGT 306

Query: 634 ALSVAV---ESRAETAVLVGVPYEA 699
              ++V   + ++E +  +   YEA
Sbjct: 307 DCKLSVCRAQKKSERSAELKRKYEA 331


>AC006790-9|AAF60735.1|  382|Caenorhabditis elegans Hypothetical
           protein Y49F6B.9 protein.
          Length = 382

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/76 (27%), Positives = 34/76 (44%)
 Frame = +1

Query: 574 KNKDSLEKALSEHGAVVEGHALSVAVESRAETAVLVGVPYEASTDYVRLLFAHCGDVAHI 753
           KN+   ++ +S   AV     +S A+   A  AV +GVP+     Y+ +  A   DV   
Sbjct: 258 KNQSKAKRVISTAAAVTTSAIVSPAI---AGVAVAIGVPFALGYTYIMVPKALVHDVVDY 314

Query: 754 HEFSKTKYKILRVTFH 801
            +  K +   +  TFH
Sbjct: 315 VQKKKRREVPIADTFH 330


>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
           protein H02F09.3 protein.
          Length = 1275

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = -1

Query: 683 PTSTAVSARDSTATESACPSTTAPCSDSAFSRLSLFLNSTIADNVGVVVSSVTMIGPRLT 504
           P +T+  A  +    SA P+TT   S S  + +++   +  +    V V + T+ GP   
Sbjct: 230 PVTTSTMATTTANVTSAAPNTTVTISTSPTTVVTVPSTAQTSSTTTVTVPTTTVTGPTTV 289

Query: 503 VLI 495
           V +
Sbjct: 290 VTV 292


>Z81594-1|CAB04745.1|  908|Caenorhabditis elegans Hypothetical
           protein T20F10.1 protein.
          Length = 908

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 132 YSRXKMPIITVSQIHTK*RPNVNANKNTDLNLKXFPIVK 16
           YSR   P    S ++T+  P    N  T L++K  P+VK
Sbjct: 213 YSRPPPPAYDSSPVNTRMTPVATDNYRTHLHMKVHPVVK 251


>Z70208-11|CAA94144.1|  598|Caenorhabditis elegans Hypothetical
           protein F54B11.11 protein.
          Length = 598

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = -1

Query: 869 VTRNPLMRSSRSSFNAFSTDSLSWNVTRKI-LYLVLLNSWMCATSPQCAN-SRRT*SVLA 696
           +T  P + SS +S   + T S ++ +   I LY  +  +    T P  +  +  T   L 
Sbjct: 429 LTYPPALNSSVTSIGNYLTTSANFTMRGYITLYYEITAASGTTTQPILSTMTSSTTKTLT 488

Query: 695 S*GTPTSTAVSARDSTATESACPSTTAPCS 606
           S  T T+T  +   +TAT +  P T+AP +
Sbjct: 489 STTTITTTKANILTTTATTTTPPVTSAPAT 518


>U39646-2|AAA80368.2|  223|Caenorhabditis elegans Hypothetical
           protein F47B7.4 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 674 TAVSARDSTATESACPSTTAPCSD 603
           T ++   ST TE  CP++T  C D
Sbjct: 86  TTMATESSTVTEETCPTSTTKCPD 109


>U39646-3|AAA80369.1|  194|Caenorhabditis elegans Hypothetical
           protein F47B7.5 protein.
          Length = 194

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 674 TAVSARDSTATESACPSTTAPCSD 603
           T ++   ST T+ ACP++T  C D
Sbjct: 57  TTLAMESSTVTKEACPTSTTKCPD 80


>AF026204-3|AAB71253.1|  424|Caenorhabditis elegans Hypothetical
           protein C30E1.8 protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = -1

Query: 683 PTSTAVSARDSTATESACPSTT--APCSDSAFSRLSLFLNSTIADNVGVVVSSVTM 522
           PT+T V+    T T    P TT       +A S +     ST+  NV ++VS+VT+
Sbjct: 277 PTTTTVTTTTKTTTTQQQPQTTQSVVIQTTATSTIQTTTKSTV--NVKLIVSTVTL 330


>AF077537-11|AAC26280.1|  230|Caenorhabditis elegans Hypothetical
           protein F16G10.13 protein.
          Length = 230

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 674 TAVSARDSTATESACPSTTAPCSD 603
           T ++   ST TE  CP+ T  C D
Sbjct: 93  TTIAMESSTVTEETCPTFTTKCPD 116


>AF016669-2|AAB66099.2|  455|Caenorhabditis elegans Hypothetical
           protein K10G6.4 protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/36 (41%), Positives = 24/36 (66%)
 Frame = +1

Query: 766 KTKYKILRVTFHDKESVEKALKLDRELRINGFLVTV 873
           K+ Y+ L+ +  D++ VE  LKLDR+ R+   LVT+
Sbjct: 354 KSLYEKLQKSAEDRQKVETTLKLDRD-RLEVSLVTM 388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,979,239
Number of Sequences: 27780
Number of extensions: 254546
Number of successful extensions: 1159
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)