Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J16
         (923 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.0  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   6.8  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   9.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   9.0  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 805 KESVEKALKLDRELRINGF 861
           K+ +E+ALK+  E+R++ F
Sbjct: 150 KKDIEEALKIREEIRVDPF 168


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +1

Query: 805 KESVEKALKLDRELRINGF 861
           K+ +E+ALK+  E+R++ F
Sbjct: 150 KKDIEEALKIREEIRVDPF 168


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 280 HGDDGIAAEGAENADESTEGDQNQEN 357
           H D  +  E    A ++T+G  NQ+N
Sbjct: 166 HLDSRVIQEAQNIAIQNTQGKNNQQN 191


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 698 AS*GTPTSTAVSARDSTATESACPSTT 618
           +S  +PTS   + R    TES  P TT
Sbjct: 123 SSQASPTSIPYATRAEIKTESIQPETT 149


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 686 TPTSTAVSARDSTATESACPSTTA 615
           T T+T  +   +TAT +A  +TTA
Sbjct: 106 TITTTTTTTTTTTATAAATATTTA 129



 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 313 ENADESTEGDQNQENPDG 366
           E AD+  + ++N+E  DG
Sbjct: 275 EGADDRDDDEENEEEEDG 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,227
Number of Sequences: 438
Number of extensions: 3142
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)