Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J15
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    32   0.73 
06_03_0417 + 20576716-20576742,20578110-20578345,20578347-205786...    31   1.3  
02_01_0711 - 5324079-5324141,5324900-5324962,5325329-5325642,532...    29   5.1  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.8  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.0  
06_03_0824 + 25105450-25105482,25105649-25106485,25106580-251067...    28   9.0  
03_02_0225 + 6565337-6565369,6565564-6565734,6566113-6566400,656...    28   9.0  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = +2

Query: 509 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPGYLSAF 685
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P + S +
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLY 341


>06_03_0417 +
           20576716-20576742,20578110-20578345,20578347-20578601,
           20578731-20579298
          Length = 361

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 22/82 (26%), Positives = 37/82 (45%)
 Frame = +3

Query: 558 STLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRDTCPPFSLRGSVALSHSSRCRYL 737
           S+ ++ +      +  PG  P+   R L   +P+  R+  P    RGS + S   R R  
Sbjct: 170 SSTRASLQLKTSAMDAPGAYPYSR-RPLFRPEPSPSREPRPLCKGRGSTSSSTGDRARSR 228

Query: 738 SSV*VVRSKLGCVHXTPRFSPT 803
           + + V R +      +PRFSP+
Sbjct: 229 TGLAVAREEPVDTALSPRFSPS 250


>02_01_0711 -
           5324079-5324141,5324900-5324962,5325329-5325642,
           5326076-5326245,5326347-5326431,5326775-5327015
          Length = 311

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +3

Query: 642 SCSDPAAYRDTCPPFSLRGSVALSHSSRCRYLSSV*VVRSKLGCV 776
           SC     +R TC P  +      SH++R  +L+   V   K+ CV
Sbjct: 32  SCLREGVFRTTCDPRLIEALPPESHNARVAFLTPKSVSPEKMACV 76


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 341 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 496
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 290 NESAN---ARGEAVCVLGALPLPRSLTRCAR 373
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0824 +
           25105450-25105482,25105649-25106485,25106580-25106738,
           25106830-25106886,25106971-25107202,25107338-25107638,
           25107703-25107976,25108051-25108152,25108244-25108525
          Length = 758

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/58 (27%), Positives = 23/58 (39%)
 Frame = +2

Query: 512 WRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPGYLSAF 685
           WR  +        T  D Q    +    +KD    P + PSC L+F P   P + S +
Sbjct: 622 WRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLY 679


>03_02_0225 +
           6565337-6565369,6565564-6565734,6566113-6566400,
           6566495-6566653,6566745-6566801,6566886-6567117,
           6567253-6567553,6567618-6567891,6567966-6568067,
           6568159-6568440
          Length = 632

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/58 (27%), Positives = 23/58 (39%)
 Frame = +2

Query: 512 WRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPGYLSAF 685
           WR  +        T  D Q    +    +KD    P + PSC L+F P   P + S +
Sbjct: 496 WRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLY 553


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,830,164
Number of Sequences: 37544
Number of extensions: 570959
Number of successful extensions: 1730
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)