Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J14
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.083
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.58
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 28 1.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 1.8
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.1
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 7.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 9.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 9.5
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/71 (36%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = -1
Query: 614 GGGXFXXXGGGGGXPP-PXXXXXXXGGXKKNXXPGGGGGXTXXGGXXGGGPPXFXXXXXG 438
GGG GG GG PP P G + GG GG G GGP F G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 437 -GGGFXFFFXG 408
GGG F G
Sbjct: 247 FGGGLGGFGGG 257
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.7 bits (81), Expect = 0.004
Identities = 29/102 (28%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Frame = +1
Query: 319 PXXXXXVFSPPIFXXXKXPP-PQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXX 495
P V +PP+ PP P+ P PP P K G PP PP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP----KPAAGVPPVPPPSE 1196
Query: 496 VXPPPPPGXXFFXXPP---XXXXXXXGGGXPPPPPXXXKXPP 612
P P P PP G PP P K PP
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +1
Query: 424 KXPPPPXXXXKKXGGPPPXX--PPXXVXPPPPPGXXFFXXPPXXXXXXXGGGXPPPPP 591
+ PP P K P P PP V PP PP PPP P
Sbjct: 1010 RVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.007
Identities = 24/81 (29%), Positives = 26/81 (32%)
Frame = +1
Query: 373 PPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPPXXX 552
PPP K + PPPP + G PP PPPP PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP-------PPPRS 345
Query: 553 XXXXGGGXPPPPPXXXKXPPP 615
G P PP PPP
Sbjct: 346 NA--AGSIPLPPQGRSAPPPP 364
Score = 34.7 bits (76), Expect = 0.016
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = +1
Query: 373 PPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPPXXX 552
PP S KK PPPP + G PP PPPP
Sbjct: 294 PPSSRVSAAALAANKKRP-PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 553 XXXXGGGXPPPPP 591
G PPPPP
Sbjct: 353 LPPQGRSAPPPPP 365
Score = 34.3 bits (75), Expect = 0.021
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 7/80 (8%)
Frame = +1
Query: 373 PPPQIFSXXGXXPX----KKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPP---GXXFF 531
PPP G P PPPP G P P PPPPP
Sbjct: 314 PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 532 XXPPXXXXXXXGGGXPPPPP 591
PP P PPP
Sbjct: 374 RQPPPLSSSRAVSNPPAPPP 393
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/81 (25%), Positives = 22/81 (27%)
Frame = +3
Query: 372 PPPPNFFXXRGXPXKKKXKXPPPXXXXXKXXGPPPXXXPXXGXAPPPPXXXIFFXPPPXX 551
PPP + KK PPP PP PPPP PPP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP-------PPPRS 345
Query: 552 XXXXXXXXXXXXXSXXKXPPP 614
S PPP
Sbjct: 346 NAAGSIPLPPQGRSAPPPPPP 366
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = +1
Query: 367 KXPPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXX----VXPPPPPGXXFFX 534
K PPP P ++ + PP PPP PP P PP G
Sbjct: 309 KRPPPP------PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRS--A 360
Query: 535 XPPXXXXXXXGGGXPPPP 588
PP G PPP
Sbjct: 361 PPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/75 (28%), Positives = 23/75 (30%), Gaps = 2/75 (2%)
Frame = +1
Query: 373 PPPQIFSXXGXXPX--KKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPPX 546
PPP + G P + PPPP PP P PPP PP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPPP---------PPRSAPSTGRQPPPLSSSRAVSNPPA 390
Query: 547 XXXXXXGGGXPPPPP 591
G P PP
Sbjct: 391 PPPAIPGRSAPALPP 405
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.009
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = +1
Query: 424 KXPPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPPXXXXXXXGGGXPPPPPXXXK 603
K PPPP P P P V PP P PP G G PPPPP
Sbjct: 730 KSPPPPPPAVIV---PTPAPAPIPVPPPAPIMGG--PPPPPPPPGVAGAGPPPPPP---- 780
Query: 604 XPPP 615
PPP
Sbjct: 781 -PPP 783
Score = 33.1 bits (72), Expect = 0.047
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Frame = +1
Query: 367 KXPPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXVX-----PPPPP 516
K PPP + P PPP GGPPP PP V PPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIM---GGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.7 bits (71), Expect = 0.063
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +1
Query: 469 PPPXXPPXXVXPPPPPGXXFFXXPPXXXXXXXGGGXPPPPP----XXXKXPPPXXXKXFX 636
PPP PP V P P PP GG PPPPP PPP
Sbjct: 732 PPP--PPPAVIVPTPAPAPIPVPPP---APIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Query: 637 GGGGXFF 657
GG ++
Sbjct: 787 AGGSRYY 793
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 346 PPIFXXXKXPPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXV 498
PP P P P PPPP G PPP PP V
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -1
Query: 686 PPPPPXXKKKKXXPPPPXXXFXXXGGGXF 600
PPPPP PPPP GG +
Sbjct: 764 PPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -1
Query: 686 PPPPPXXKKKKXXPPPPXXXFXXXGGG 606
PPPPP PPPP GG
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 32.3 bits (70), Expect = 0.083
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXX--PPXXVXPPPP----PGXXFFXXPPXXXXXXXGGGXPPPP- 588
PPPP PPP P PPPP PG PP G PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---PPPPMHHEPGEHMPPPPM 264
Query: 589 ---PXXXKXPPP 615
P PPP
Sbjct: 265 HHEPGEHMPPPP 276
Score = 32.3 bits (70), Expect = 0.083
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXX--PPXXVXPPPP----PGXXFFXXPPXXXXXXXGGGXPPPP- 588
PPPP PPP P PPPP PG PP G PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---PPPPMHHEPGEHMPPPPM 277
Query: 589 ---PXXXKXPPP 615
P PPP
Sbjct: 278 HHEPGEHMPPPP 289
Score = 32.3 bits (70), Expect = 0.083
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXX--PPXXVXPPPP----PGXXFFXXPPXXXXXXXGGGXPPPP- 588
PPPP PPP P PPPP PG PP G PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---PPPPMHHEPGEHMPPPPM 290
Query: 589 ---PXXXKXPPP 615
P PPP
Sbjct: 291 HHEPGEHMPPPP 302
Score = 32.3 bits (70), Expect = 0.083
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 10/72 (13%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXX--PPXXVXPPPP----PGXXFFXXPPXXXXXXXGGGXPPPP- 588
PPPP PPP P PPPP PG PP G PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHM---PPPPMHHEPGEHMPPPPM 303
Query: 589 ---PXXXKXPPP 615
P PPP
Sbjct: 304 HHEPGEHMPPPP 315
Score = 29.9 bits (64), Expect = 0.44
Identities = 25/87 (28%), Positives = 28/87 (32%), Gaps = 6/87 (6%)
Frame = +1
Query: 373 PPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPP--GXXFFXXPPX 546
PPP + G + PPP + PPP PPPP PP
Sbjct: 247 PPPPMHHEPG-----EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Query: 547 XXXXXXGGGXPPPP----PXXXKXPPP 615
G PPPP P PPP
Sbjct: 302 PMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 686 PPPPPXXKKKKXXPPPP 636
PPPP K + PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPP 224
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 211 PMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 251
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 224 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 264
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 237 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 277
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 250 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 290
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 303
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 276 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 316
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +2
Query: 470 PPXXXPXXXXXPPPPXGEXFFXPPPXXXXXXXGGGXPPPPL 592
P P PPP E PP G PPPP+
Sbjct: 289 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 329
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 469 PPPXXPPXXVXPPPPPGXXFFXXPPXXXXXXXGGGXPPPPPXXXKXPP 612
P PP P PPP PP G PPPP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXXPPXXVXPPPPP 516
PPPP PP P PPP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/61 (24%), Positives = 17/61 (27%)
Frame = +1
Query: 337 VFSPPIFXXXKXPPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPP 516
V +PP+ PP P P P PPP P P P
Sbjct: 1687 VSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Query: 517 G 519
G
Sbjct: 1747 G 1747
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/45 (28%), Positives = 15/45 (33%)
Frame = +1
Query: 409 PXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPP 543
P + + PP PP PP PP P G PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXXPPXXVXPPPPPG 519
PPPP PP PP PPPPPG
Sbjct: 9 PPPPPP-------PPGFEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +1
Query: 472 PPXXPPXXVXPPPPPGXXFFXXPPXXXXXXXGGGXPPPPPXXXK 603
PP PP PPPPPG PP PPPPP K
Sbjct: 5 PPGNPPP---PPPPPGFEPPSQPP-----------PPPPPGYVK 34
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 684 PPPPPXXKKKKXPPPP 637
PPPPP + PPPP
Sbjct: 12 PPPPPGFEPPSQPPPP 27
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
Frame = +1
Query: 463 GGPPPXXPPXXVXPP--PPP 516
G PPP PP PP PPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPP 26
Score = 26.6 bits (56), Expect = 4.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXXPPXXV 498
PPPP + PPP PP V
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYV 33
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 686 PPPPPXXKKKKXXPPPP 636
PPPPP + PPPP
Sbjct: 11 PPPPPPGFEPPSQPPPP 27
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/45 (26%), Positives = 16/45 (35%)
Frame = +1
Query: 409 PXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPP 543
P ++ PPP + PP + PPP P PP
Sbjct: 2 PRRRSAAPPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPP 46
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXXPPXXVXPPPPP 516
PPPP GPP P + P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 436 PPXXXXKKXGGPPPXXPPXXVXPPPPP 516
PP G P P P V P PPP
Sbjct: 1022 PPRSGSSSSGVPAPNLTPVNVPPTPPP 1048
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +1
Query: 340 FSPPIFXXXKXPPPQIFSXXGXXPXKKXKXPPPPXXXXKKXGGPPPXXPPXXVXPPPPP 516
+S P + PP + P + P ++ PPP P PPPP
Sbjct: 97 YSQPSYSQPSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPP 155
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +1
Query: 433 PPPXXXXKKXGGPPPXXPPXXVXPPPPP 516
PPP P P PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPP 194
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 9.5
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Frame = +1
Query: 430 PPPPXXXXKKXGGPPPXXPPXXVXPPPPPGXXFFXXPPXXXXXXXGGGXPPP--PPXXXK 603
PP P + PP PP PPP P P PPP P K
Sbjct: 130 PPTPQSELR----PPTSAPPRPSIPPPSPAS---APPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 604 XPP 612
PP
Sbjct: 183 SPP 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,434,321
Number of Sequences: 5004
Number of extensions: 50244
Number of successful extensions: 370
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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