Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J12
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   131   6e-31
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   129   2e-30
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   129   2e-30
Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...    53   3e-07
Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical pr...    40   0.002

>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  131 bits (317), Expect = 6e-31
 Identities = 64/77 (83%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
 Frame = +3

Query: 63  LALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 242
           LALNFSVF+YEILN+PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT
Sbjct: 172 LALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 231

Query: 243 SDTQGDGDE--PAEGGD 287
           SD   D  +    EGG+
Sbjct: 232 SDAATDDTDANETEGGN 248


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/73 (86%), Positives = 66/73 (90%)
 Frame = +3

Query: 63  LALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 242
           LALNFSVFYYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT
Sbjct: 171 LALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 230

Query: 243 SDTQGDGDEPAEG 281
           SD  G  D+  EG
Sbjct: 231 SDV-GAEDQEQEG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/73 (86%), Positives = 66/73 (90%)
 Frame = +3

Query: 63  LALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 242
           LALNFSVFYYEILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT
Sbjct: 171 LALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWT 230

Query: 243 SDTQGDGDEPAEG 281
           SD  G  D+  EG
Sbjct: 231 SDV-GAEDQEQEG 242


>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score = 53.2 bits (122), Expect = 3e-07
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +3

Query: 63  LALNFSVFYYEILNSPDKACQLAKQ 137
           LALNFSVF+YEILN+PDKACQLAKQ
Sbjct: 172 LALNFSVFFYEILNAPDKACQLAKQ 196


>Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical
           protein M117.3 protein.
          Length = 125

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = +3

Query: 63  LALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNE--DSYKDSTLIMQLLRDNLTL 236
           LALN S   +++LN P +A ++A+ A D A  EL+ +    DSY  S L       +L  
Sbjct: 49  LALNASALNFDVLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRARTLYDLLK 108

Query: 237 WTSDTQGDGDEPAEGGDN 290
            T + + DG E  E  DN
Sbjct: 109 STHEQRVDGKE-GEEADN 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,636,045
Number of Sequences: 27780
Number of extensions: 212581
Number of successful extensions: 702
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)