Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J11
(1026 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.012
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.20
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.26
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.26
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.35
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.61
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.9
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 5.7
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.012
Identities = 29/127 (22%), Positives = 39/127 (30%), Gaps = 1/127 (0%)
Frame = +1
Query: 556 PXXLGXTIPSPXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXER 735
P + T P P S+ P G P AP + P S
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPA----PSGAPPVPAP 1088
Query: 736 PPLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPR-EVE 912
+ P + P P PP P + PP +P + PP + P P+ V
Sbjct: 1089 SGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA 1148
Query: 913 XPXXPPP 933
P P P
Sbjct: 1149 APPVPAP 1155
Score = 35.5 bits (78), Expect = 0.012
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 784 PPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPR-EVEXPXXPPP 933
P P PP P+ + PP +P + PP + + P P+ V P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 34.7 bits (76), Expect = 0.021
Identities = 31/119 (26%), Positives = 36/119 (30%), Gaps = 3/119 (2%)
Frame = +1
Query: 583 SPXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXERPPLRPXXXE 762
+P P S PP P P V P P PP+ P
Sbjct: 1082 APPVPAPSGIPPVPKPSVAA--PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPV-PVPSG 1138
Query: 763 XTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPP---XXSXTPXXPXPREVEXPXXPP 930
P P P PP P + PP +P + PP S P P P P PP
Sbjct: 1139 APP---VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 31.9 bits (69), Expect = 0.15
Identities = 29/113 (25%), Positives = 37/113 (32%), Gaps = 9/113 (7%)
Frame = +1
Query: 625 HEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXX-ERPPLRPXXXEXTPS*SXP----P 789
++G P AP P P S T + PP P + S + P P
Sbjct: 953 NDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVP 1012
Query: 790 PXXT----DPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPPP 936
P PP PL + PP + PP T P P+ PPP
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 31.9 bits (69), Expect = 0.15
Identities = 32/115 (27%), Positives = 39/115 (33%), Gaps = 6/115 (5%)
Frame = +1
Query: 574 TIPSPXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXERPPL-RP 750
++ +P P S APP P AP + P P E PP+ +P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAA--PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Query: 751 XXX-EXTPS*SXPPPXXTD----PPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXP 900
P S PP T PP P+ T PP S P S TP P
Sbjct: 1204 SVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVS-TPRSSVP 1257
Score = 30.7 bits (66), Expect = 0.35
Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Frame = +1
Query: 586 PXXPXSSXAPPXX-HEGXXXXIPXXX-APXXPVTPXPXWRXRKSRTMXXXERPPLRPXXX 759
P SS APP IP AP P+ P KS + PP+
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI-PTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 760 EX----TPS*SXPPPXXTD-PPXPLXTXXPPP-NRPXXSXPPXXSXTPXXPXPR-EVEXP 918
E PS + P P + PP P + PP +P + PP + + P P+ V P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Query: 919 XXPPP 933
P P
Sbjct: 1132 PVPVP 1136
Score = 30.3 bits (65), Expect = 0.46
Identities = 31/121 (25%), Positives = 38/121 (31%)
Frame = +1
Query: 574 TIPSPXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXERPPLRPX 753
++ +P P S APP P AP P P P P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAA--PPVPAPSG-APPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 754 XXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPP 933
P PPP PP P + PP P + PP + + P P V PP
Sbjct: 1184 PAAGVPP--VPPPSEA-PPVPKPSVGVPPVPPPSTAPPVPTPSAGLP-PVPVPTAKAPPV 1239
Query: 934 P 936
P
Sbjct: 1240 P 1240
Score = 28.7 bits (61), Expect = 1.4
Identities = 31/118 (26%), Positives = 36/118 (30%), Gaps = 2/118 (1%)
Frame = +1
Query: 586 PXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXERPPLRPXXXEX 765
P S APP +P PV P P + PP+ P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV-PAPSGAPPVPKPSVAA--PPV-PAPSSG 1177
Query: 766 TPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXP--PXXSXTPXXPXPREVEXPXXPPP 933
P P P PP P + PP +P P P S P P P P P P
Sbjct: 1178 IPP--VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP-SAGLPPVPVP 1232
Score = 26.6 bits (56), Expect = 5.7
Identities = 27/118 (22%), Positives = 33/118 (27%)
Frame = +1
Query: 580 PSPXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXERPPLRPXXX 759
P P P S PP P P P + + R P P
Sbjct: 961 PRPAAPPS--IPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLS 1018
Query: 760 EXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPP 933
P P P PP P+ + PP P + P S + P V P P
Sbjct: 1019 SKAPP--VPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 25.8 bits (54), Expect = 9.9
Identities = 28/120 (23%), Positives = 35/120 (29%), Gaps = 3/120 (2%)
Frame = +1
Query: 583 SPXXPXSSXAPPXXHEGXXXXIPXXXAPXXPVTPXPXWRXRKSRTMXXXERPPLRPXXXE 762
SP P + P +P A P+ P P PP+ P
Sbjct: 1003 SPAAPLARVPPVPKLSSKAPPVPLPSADAPPI-PVPS---TAPPVPIPTSTPPV-PKSSS 1057
Query: 763 XTPS*SXPPPXXTD--PPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPR-EVEXPXXPPP 933
PS P P + P P + PP P P P P+ V P P P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.20
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +1
Query: 790 PXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPPP 936
P T P P P + P PP P P P PPPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.35
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 805 PPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPP 933
P P+ T PP RP + PP S P P V P PP
Sbjct: 1683 PAHPVST---PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 736 PPLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXP 894
PP+RP P S P P PP P+ + PPP+ P P + P P
Sbjct: 1690 PPVRPQSAAP-PQMSAPTP----PPPPM-SVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 4.3
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 617 PPXMKAX-PQXSPVXXPXXXRSRPXXXGAPASPXP*XXQNGPPS 745
PP M A P P+ P + P G P++P P + PS
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 25.8 bits (54), Expect = 9.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 736 PPLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXP 864
PP P S PPP P PPP P S P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.26
Identities = 26/115 (22%), Positives = 30/115 (26%), Gaps = 4/115 (3%)
Frame = +1
Query: 649 PXXXAPXXPVTPXPXWRXRKSRTMXXXERPPLRPXXXEXTPS*SXPPPXXTDPPXPLXTX 828
P + P P P R + +RPP P PP
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRG---KPPIGNGSSNSSLPP 338
Query: 829 XPPPNRPXXSX----PPXXSXTPXXPXPREVEXPXXPPPPXXXQXXSQXSPXXDP 981
PPP R + PP P P PR PPP P P
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 30.3 bits (65), Expect = 0.46
Identities = 34/130 (26%), Positives = 40/130 (30%), Gaps = 7/130 (5%)
Frame = +1
Query: 568 GXTIPSPXXPXSSXA----PPXXHEGXXXXIPXXXAPXXPVTPXPXWRX--RKSRTMXXX 729
G + P P P S+ + PP P P P P SRT
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRT---- 412
Query: 730 ERPPLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSX-PPXXSXTPXXPXPRE 906
PP+ P PS P P P+ PP P PP + P P P
Sbjct: 413 STPPV-PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP-PLP 470
Query: 907 VEXPXXPPPP 936
P PP P
Sbjct: 471 PAAPAPPPAP 480
Score = 27.9 bits (59), Expect = 2.4
Identities = 26/102 (25%), Positives = 32/102 (31%), Gaps = 6/102 (5%)
Frame = +1
Query: 736 PPLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXP----- 900
PP+ P PS S PP P PPP+ S PP P P
Sbjct: 230 PPIPPSI----PS-SRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAI 284
Query: 901 REVEXPXXPPPPXXXQXXS-QXSPXXDPLXXNPLXRHLGRSP 1023
P PPP + + P P R+ G+ P
Sbjct: 285 NSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPP 326
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.26
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +1
Query: 784 PPPXXTDPPXPLXTXXP-PPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPPP 936
PPP P P P PP P PP P P P PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP---PPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 778 SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREVEXPXXPPPP 936
S PPP PP + P P P P P P V PPPP
Sbjct: 731 SPPPP----PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +1
Query: 832 PPPNRPXXSXP-PXXSXTPXXPXPREVEXPXXPPPPXXXQXXSQXSPXXDP 981
PPP P P P + P P + P PPPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.35
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +1
Query: 778 SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXPREV-EXPXXPPPP 936
S PP PP P PP + P P S P P + P PPP
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 28.3 bits (60), Expect = 1.9
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Frame = +1
Query: 742 LRPXXXEXTPS*SXPPPXX-TDPP-----XPLXTXXPPPNRPXXSXPPXXSXTPXXPXPR 903
LRP P S PPP + PP P+ + PPP +P S P P
Sbjct: 137 LRPPT-SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS-APSLPSAV 194
Query: 904 EVEXPXXPPPP 936
P PPPP
Sbjct: 195 PPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.3
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 3/61 (4%)
Frame = +1
Query: 760 EXTPS*SXPPPXXTDPPXPLXTXXPP---PNRPXXSXPPXXSXTPXXPXPREVEXPXXPP 930
E P S PP PP P P P P PP P P P P
Sbjct: 136 ELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 931 P 933
P
Sbjct: 196 P 196
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.9 bits (64), Expect = 0.61
Identities = 26/110 (23%), Positives = 33/110 (30%), Gaps = 3/110 (2%)
Frame = +1
Query: 664 PXXPVTPXPXWRXRKSRTMXXXERP--PLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPP 837
P PV P ++ E P P RP + S P P + + P
Sbjct: 533 PAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQP 592
Query: 838 PNRPXXSXPPXXSXTPXXPXPREV-EXPXXPPPPXXXQXXSQXSPXXDPL 984
P P P P P EV P P P + S P P+
Sbjct: 593 PVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPV 642
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.9
Identities = 32/134 (23%), Positives = 40/134 (29%), Gaps = 7/134 (5%)
Frame = +1
Query: 556 PXXLGXTIPSPXXPXSSXAPPXXHEGXXXXIPXXXAPXX--PVTPXPXWRXRKSRTMXXX 729
P G P+ P S +PP + P P P P P + +
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADAN 207
Query: 730 ERPPLRPXXXEXTPS*SXPPPXXTDPPXPLXTXXPPPNRPXXSXPPXXSXTPXXPXP-RE 906
E +P PP PL PPP + PP + T P P R
Sbjct: 208 EPDDYYSSGRAVSPE--IPPTYTPKQADPLPAPPPPP---PPTLPPQSTNTSQLPMPSRN 262
Query: 907 V----EXPXXPPPP 936
V PPPP
Sbjct: 263 VNNLGSQVNIPPPP 276
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 5.7
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = +2
Query: 539 PPGXXLXXXXGXPSPPXXXPXHXXPXPPXMKAXPQXSPVXXPXXXR--SRPXXXGAPASP 712
PPG L G P P PP M A P P P + P GA A P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGM-ALPPGMPAPFPGYPAVPAMPGIPGATAPP 558
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,042,844
Number of Sequences: 5004
Number of extensions: 26842
Number of successful extensions: 125
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 535245848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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