Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J06
         (928 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128           31   1.7  
11_04_0346 + 16623134-16623583,16623923-16623979,16626872-16627024     29   5.2  
10_08_1034 + 22461397-22461702,22462311-22462524,22464936-224649...    29   5.2  
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442...    28   9.2  
02_04_0342 - 22163650-22163709,22164137-22164391                       28   9.2  

>10_05_0051 + 8576660-8576726,8579724-8579888,8579984-8581128
          Length = 458

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = +3

Query: 231 CNVTAIEPCKGKNEVC--VQKTLQCVCEKGFIRVGDDCEEPSDDTGGPHGATAAIVSIFT 404
           C+  +  PC G   +C     +  C C +G+   GD  E+P      P  A  A+     
Sbjct: 27  CDRPSDYPCHG---ICQDTDGSYDCKCHRGYQNSGDPKEQPCSPK-FPLAAQIALGITLG 82

Query: 405 IALIVCGLVLVV---RKYNLIEYMRQ 473
           I+ ++ GL+ ++   +K  + EY R+
Sbjct: 83  ISFLIVGLLFILMMRQKRRMNEYFRK 108


>11_04_0346 + 16623134-16623583,16623923-16623979,16626872-16627024
          Length = 219

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = -1

Query: 550 GLNGGSSLPIMTSSYITSFVLR*LIFCLIYSIKLYFLTTNTRP 422
           G+ GG    +M+   + + VL  ++FC +  +KL  LT ++ P
Sbjct: 9   GVGGGGGSKVMSPKQVLTVVL--VVFCALSFVKLLLLTGSSSP 49


>10_08_1034 +
           22461397-22461702,22462311-22462524,22464936-22464997,
           22465035-22465381,22465495-22465591
          Length = 341

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 244 AVTLQGRMWSDVTYCRKFK 188
           A+ L    WSD+T+CR+FK
Sbjct: 154 ALQLDENTWSDLTFCRRFK 172


>09_04_0359 +
           16941904-16942110,16943636-16943785,16944084-16944293,
           16944376-16944452,16944554-16944698
          Length = 262

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +3

Query: 354 DTGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQK 476
           DT     A A  +SI  I+LIVC +V V++ ++L +Y R+K
Sbjct: 221 DTSEKTNARATWLSI--ISLIVCIIVSVLQLWHLQQYFRKK 259


>02_04_0342 - 22163650-22163709,22164137-22164391
          Length = 104

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
 Frame = +3

Query: 150 MGPNTIDIIAAFTLNFLQY---VTSDHILPCNVTAIEPCKGKNEVC 278
           M P T  I  A TL  L     VT   +LP     I+ C GK E C
Sbjct: 1   MAPMTSKIAGALTLVLLLVLTAVTEGQVLPTPCCRIDCCDGKPECC 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,115,858
Number of Sequences: 37544
Number of extensions: 369304
Number of successful extensions: 777
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)