Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J06
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.67
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.67
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.67
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 30 2.7
U70857-5|AAB09171.1| 98|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical ... 29 3.6
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr... 29 4.7
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 29 4.7
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 29 6.2
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 29 6.2
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 29 6.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 6.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 6.2
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 29 6.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 6.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 6.2
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 8.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 8.2
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 8.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 8.2
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 231 CNVTAIEPCKGKNEVCVQKTLQCVCEKGFIRVGDDCE 341
C +P + VC Q T QC+C++GF GD C+
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF--AGDKCD 595
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 231 CNVTAIEPCKGKNEVCVQKTLQCVCEKGFIRVGDDCE 341
C +P + VC Q T QC+C++GF GD C+
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF--AGDKCD 595
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 231 CNVTAIEPCKGKNEVCVQKTLQCVCEKGFIRVGDDCE 341
C +P + VC Q T QC+C++GF GD C+
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF--AGDKCD 595
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.9 bits (69), Expect = 0.67
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 231 CNVTAIEPCKGKNEVCVQKTLQCVCEKGFIRVGDDCE 341
C +P + VC Q T QC+C++GF GD C+
Sbjct: 561 CKFCNCDPMGTEGGVCDQTTGQCLCKEGF--AGDKCD 595
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = +3
Query: 255 CKGKNEVCVQK--TLQCVCEKGFIRVGDDC----EEPSDDT 359
C G N CV K T C CE GF+ G C ++P D T
Sbjct: 1503 CCGANAKCVNKPGTYSCECENGFLGDGYQCVPTTKKPCDST 1543
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical protein
E01G6.1 protein.
Length = 1391
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +3
Query: 231 CNVTAIEP--CKGKNEVCVQKTLQCVCEKGF 317
C T IE C KN C +KT+ C C+ G+
Sbjct: 1284 CMETLIEEKRCLVKNSYCSEKTITCTCQLGY 1314
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = -3
Query: 353 ITRLFTVVTNSNKTFFADTLQCLLDANLIFPLTRLDCGHITRQDVVRCNVLQE 195
+ + V +S TFF DTLQ L +AN ++ + D +Q V++ + L E
Sbjct: 184 LLEILPAVFDSRITFFVDTLQTLFNANSVY---QTDASKFHKQIVMQLDKLGE 233
>U70857-5|AAB09171.1| 98|Caenorhabditis elegans Hypothetical
protein C10G8.4 protein.
Length = 98
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 240 TAIEP-CKGKN-EVCVQKTLQ--CVCEKGFIRVGDDCEEPSD 353
TA EP C+ N +VC + + C C +GF+R + C P D
Sbjct: 51 TACEPTCQNPNPQVCTLQCILNVCQCSQGFVRGPNGCVPPQD 92
>AL032660-1|CAA21752.1| 711|Caenorhabditis elegans Hypothetical
protein Y70G10A.2 protein.
Length = 711
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 249 EPCKGKNEVCVQKTLQCVCEKGFIRVGDDCE-EPSDDTGGPHGATAAIVSIFTI 407
E C GKN VC + + C+ + GD CE E S + G G ++ + + T+
Sbjct: 171 EAC-GKNGVCTSELAEVSCKCNWGYAGDRCEKEKSKEYKGDLGYSSVVGATITL 223
>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
protein ZC84.1 protein.
Length = 1556
Score = 29.1 bits (62), Expect = 4.7
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 156 PNTIDIIAAFTLNFLQYVTSDHILPCNVTAI--EPCKGKNEVCVQKTLQCVCEKGFIRVG 329
P T ++I + NFL+ V + +L VT E +G + +Q +Q G RVG
Sbjct: 47 PQT-NLIQESSTNFLECVQNRWVLRECVTGTIYESGRGCVDPTIQPFMQGFSVSGSGRVG 105
Query: 330 DDCEEPSDDTGGPHGATAAIVSIFTIAL 413
D C+ +D G + AT + T L
Sbjct: 106 DVCQYNTDCLSGMYCATGLCSCLSTYIL 133
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = +3
Query: 249 EPCKGKNEVCVQ---KTLQCVCEKGFIRVGDDCEEP 347
+ CK +C++ K QCVC +GF V C P
Sbjct: 1945 DECKKCPSLCLRSSDKKFQCVCSQGFELVNGKCRSP 1980
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 255 CKGKNEVCVQKTLQCVCEKGFIRVGDDC 338
CK N C ++T +C C+ GF G DC
Sbjct: 561 CKCVNGKCDKETGECTCQPGFF--GSDC 586
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 255 CKGKNEVCVQKTLQCVCEKGFIRVGDDC 338
CK N C ++T +C C+ GF G DC
Sbjct: 561 CKCVNGKCDKETGECTCQPGFF--GSDC 586
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 255 CKGKNEVCVQKTLQCVCEKGFIRVGDDC 338
CK N C ++T +C C+ GF G DC
Sbjct: 561 CKCVNGKCDKETGECTCQPGFF--GSDC 586
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 357 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 473
+ G + AA I IALIV GL+L+ ++ Y+RQ
Sbjct: 737 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 775
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 357 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 473
+ G + AA I IALIV GL+L+ ++ Y+RQ
Sbjct: 735 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 773
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 255 CKGKNEVCVQKTLQCVCEKGFIRVGDDC 338
CK N C ++T +C C+ GF G DC
Sbjct: 561 CKCVNGKCDKETGECTCQPGFF--GSDC 586
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 357 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 473
+ G + AA I IALIV GL+L+ ++ Y+RQ
Sbjct: 737 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 775
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 357 TGGPHGATAAIVSIFTIALIVCGLVLVVRKYNLIEYMRQ 473
+ G + AA I IALIV GL+L+ ++ Y+RQ
Sbjct: 735 SSGKQSSAAASWIIAIIALIVLGLLLLATSLFILRYIRQ 773
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Frame = +3
Query: 231 CNVTAIEPCK-GKNEVC--VQKTLQCVCEKGFIRVGD-------DCEEPSDDTGGPHGAT 380
C+V+ C K EVC V+ T +C C G+ R+ D +C EP +T G +
Sbjct: 236 CDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINECAEPRLNTCGKNAEC 295
Query: 381 AAIVSIFT 404
+ +T
Sbjct: 296 IDLAEGYT 303
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Frame = +3
Query: 231 CNVTAIEPCK-GKNEVC--VQKTLQCVCEKGFIRVGD-------DCEEPSDDTGGPHGAT 380
C+V+ C K EVC V+ T +C C G+ R+ D +C EP +T G +
Sbjct: 820 CDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINECAEPRLNTCGKNAEC 879
Query: 381 AAIVSIFT 404
+ +T
Sbjct: 880 IDLAEGYT 887
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Frame = +3
Query: 231 CNVTAIEPCK-GKNEVC--VQKTLQCVCEKGFIRVGD-------DCEEPSDDTGGPHGAT 380
C+V+ C K EVC V+ T +C C G+ R+ D +C EP +T G +
Sbjct: 236 CDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINECAEPRLNTCGKNAEC 295
Query: 381 AAIVSIFT 404
+ +T
Sbjct: 296 IDLAEGYT 303
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Frame = +3
Query: 231 CNVTAIEPCK-GKNEVC--VQKTLQCVCEKGFIRVGD-------DCEEPSDDTGGPHGAT 380
C+V+ C K EVC V+ T +C C G+ R+ D +C EP +T G +
Sbjct: 820 CDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINECAEPRLNTCGKNAEC 879
Query: 381 AAIVSIFT 404
+ +T
Sbjct: 880 IDLAEGYT 887
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 219 HILPCNVTAIEPCKGKNEVCVQKTLQCVCEKGFIRVGDDC 338
H++P C G N+VC+Q QC C G+ + C
Sbjct: 1659 HVVPDMGNCQRQC-GNNQVCIQD--QCQCRNGYYAQTETC 1695
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Frame = +3
Query: 231 CNVTAIEPCK-GKNEVC--VQKTLQCVCEKGFIRVGD-------DCEEPSDDTGGPHGAT 380
C+V+ C K EVC V+ T +C C G+ R+ D +C EP +T G +
Sbjct: 820 CDVSDPMSCDPAKREVCIFVENTYKCRCANGYSRLPDGRCVVINECAEPRLNTCGKNAEC 879
Query: 381 AAIVSIFT 404
+ +T
Sbjct: 880 IDLAEGYT 887
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,190,689
Number of Sequences: 27780
Number of extensions: 361208
Number of successful extensions: 975
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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