Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J06
         (928 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   2.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   2.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   2.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.9  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    22   6.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   9.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 573 IFGYYYNKMELSVEV*CCSLNNVTKCRLKI 662
           IFG +  K+ L+ +V CC+ + +  C + +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIAL 132


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 573 IFGYYYNKMELSVEV*CCSLNNVTKCRLKI 662
           IFG +  K+ L+ +V CC+ + +  C + +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIAL 132


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 573 IFGYYYNKMELSVEV*CCSLNNVTKCRLKI 662
           IFG +  K+ L+ +V CC+ + +  C + +
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIAL 132


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
 Frame = -3

Query: 359  CIITRLFTVVTNSNKTFFADTLQCLLDANLIFPLTRLDCGHITRQDV-VRCNVLQEI*GK 183
            C+ T    VVTN   T    T   +  +    P+T L     +   + V  +V+ ++  +
Sbjct: 823  CVTTEQSVVVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSITVEKDVINDVKTQ 882

Query: 182  CSNN 171
             + N
Sbjct: 883  ITTN 886


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 205 YCRKFKVNAAIISIVFGPI 149
           YC  +K +   +S+ FGP+
Sbjct: 66  YCETYKNSIYDVSMTFGPV 84


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 521 HDVLVHNIICSSLINLLPHIFN 456
           H+V V+NI+ +S  +L   IF+
Sbjct: 275 HNVFVNNILAASACSLFVVIFH 296


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,802
Number of Sequences: 438
Number of extensions: 4724
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30234750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)