Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_J04
(930 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0177 + 1247937-1249067 33 0.43
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 31 0.99
12_02_0057 + 13006980-13006985,13007066-13007542 30 2.3
09_02_0489 - 9847903-9848081,9848916-9849107,9849195-9849276,984... 30 2.3
01_07_0312 + 42677752-42678561,42678701-42678910,42679597-426797... 30 2.3
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 30 2.3
01_05_0629 + 23809899-23810720 30 2.3
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260... 30 3.0
03_01_0092 - 731069-731434,731569-733080 29 5.3
02_01_0377 + 2728892-2729187,2729483-2729544,2730516-2730570,273... 29 5.3
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 5.3
07_03_0878 - 22251023-22251166,22251279-22251329,22251425-222515... 29 7.0
11_03_0125 - 10346779-10347282,10347613-10347771,10348063-10348212 28 9.2
>07_01_0177 + 1247937-1249067
Length = 376
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +1
Query: 253 GSGAWSELAARHPDIAARLRQRPATWARKRRPSSNDATDDFGDNFSGFDRFPFDDIPPEF 432
G+ A + L HP +AAR R+R A A S DA D + + F R D IPP
Sbjct: 19 GASAGAYLVYHHPAVAAR-RRRIARVA-SALASLADAVADVASDLAAFLRSDSDSIPPTV 76
Query: 433 RE 438
R+
Sbjct: 77 RQ 78
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 31.5 bits (68), Expect = 0.99
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +1
Query: 634 KSPADPSLVDADDRTHRSMSAPPDTPNQTKDECTQSPGADPSASRRDPV*CPTHTDIRRR 813
++PA A D HR S+PP T + + + S P+A+ T
Sbjct: 18 QTPAGSGGGGAGDGHHRDFSSPPSTTSSSSSSSSSSSTNSPTATAASSSSTNTSGAAIVH 77
Query: 814 PRQASHQQVSGPRHT 858
P +SH V+ H+
Sbjct: 78 PTTSSHPSVASGHHS 92
>12_02_0057 + 13006980-13006985,13007066-13007542
Length = 160
Score = 30.3 bits (65), Expect = 2.3
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Frame = +1
Query: 175 QWNHLXVLDKPPEYHGDRGFPFEEEEGSGAWSEL--AARHPDI------AARLRQRPATW 330
+WN+ D+ P G P ++E S W A R P AA RQ+P
Sbjct: 16 EWNYYHGGDELPSAAAAGGAPDDQEASSDVWFRYSPAPRKPAPKKARRRAADNRQKPVGG 75
Query: 331 ARKRRPSSNDATD 369
KRRP+ ++D
Sbjct: 76 GNKRRPARTSSSD 88
>09_02_0489 -
9847903-9848081,9848916-9849107,9849195-9849276,
9849529-9849722,9851009-9851601,9851827-9851870
Length = 427
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 619 VDLGQKSPADPSLVDADDRTHRSMSAPPDTPNQTKDECTQSPGADPSASRRD 774
+ + + +PA PS D+ + +S D + +CT A P AS D
Sbjct: 145 IHMHEGAPAPPSAHVVDEEGRQEVSVEDDADGHQRSKCTDGVPAAPQASAAD 196
>01_07_0312 +
42677752-42678561,42678701-42678910,42679597-42679704,
42679915-42680010,42680090-42680182,42680276-42680386,
42680482-42680514,42680592-42680642,42680960-42681037,
42681145-42681165
Length = 536
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 476 ATNNHNSRRPLRQLNHSNKRPPHRLNRLRRTANTSS 583
AT NH RP +++ S ++PPH+L R + A TSS
Sbjct: 35 ATENH---RP-KEIGPSGEKPPHKLLRAKGKAGTSS 66
>01_05_0808 -
25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 337 KRRPSSNDATDDFGDNFSGFDRF--PFDDIPPEFREHF 444
+R+ SS DA +GD F G +F FD +P ++ E F
Sbjct: 20 RRKASSTDAAAAYGDVFGGPPQFAVAFDGVPADYGEVF 57
>01_05_0629 + 23809899-23810720
Length = 273
Score = 30.3 bits (65), Expect = 2.3
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Frame = +1
Query: 622 DLGQKSPADPSLVDAD-----DRTHRSMSAPPDTPNQTKDECTQSPGADPSASRRDPV*C 786
D + S ADP+ DA D R+ SA P++ T + + SA R D + C
Sbjct: 152 DASEPSEADPAATDASEPSEADPAPRATSADASEPSEADPAATAASAS--SAGRFDAMRC 209
Query: 787 PTHTDIRR------RPRQASHQQVSGPRHTL 861
R P A HQ + PRH L
Sbjct: 210 REGRGSRSPPSSNLHPAAAQHQSPATPRHRL 240
>02_01_0362 +
2607097-2607371,2607766-2608612,2608842-2608910,
2609968-2610202,2610454-2610536,2610924-2611046,
2611326-2611379
Length = 561
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 178 WNHLXVLDKPPEYHGDRGFPFEEEEGSGAWSELAARHPDIAARLRQ--RPATWAR 336
++HL +L + P + +G P+ + G W +A +HP ++ +L R + W++
Sbjct: 271 FDHLKLLPQKPVENFFKGLPYAVGDQHGDWIAIAHQHPLLSMQLSHGYRISNWSQ 325
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 29.1 bits (62), Expect = 5.3
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Frame = +1
Query: 574 HEQQTQIP-QYGLRNTVDLGQKSPADPSLVDADDRTHRSMSAPPDTPNQTKDECTQSPGA 750
H QQT P Q + + + + P + + +APP P + D G
Sbjct: 255 HHQQTPPPIQVQPHHIMPMTPQPQLQPPQPQSKEANTVVRAAPP--PQEQHDTAASGGGG 312
Query: 751 DPSASRRDPV*CPTHTDIRRRPRQASHQQVSGPRHTLW 864
S+SR H I+ R + Q SGP+ LW
Sbjct: 313 GASSSRWPKA--EVHALIQLRTELETRYQDSGPKGPLW 348
>02_01_0377 +
2728892-2729187,2729483-2729544,2730516-2730570,
2730784-2730858,2730980-2731054,2731155-2731202,
2731548-2732357,2732450-2732498,2733157-2733266,
2733381-2733488,2733920-2733980
Length = 582
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 458 TAGSALATNNHNSRRPLRQLNHSNKRPPHRLNRLRRTANTSSKPRYHSTDS 610
TAG+A + N + P ++ NKR H L T S P+ H S
Sbjct: 209 TAGTASKSGNDSDGIPADDEDYHNKRRRHHRGPLEETELVSVAPKAHPVSS 259
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +2
Query: 683 DLCQRPQTHLIKQKMSVHNHQEQTHQPHGETQSNVRHIPIFVEGRDKPVINKSVDHGTH 859
DLCQ+ H+ +Q+ H + + HG + + F +G+ V+ + G H
Sbjct: 317 DLCQKLGIHVERQEQPNHGPKNSGSEMHGSFGPDSANASSFEKGQSSAVMYSQENGGEH 375
>07_03_0878 -
22251023-22251166,22251279-22251329,22251425-22251500,
22251847-22252229,22252983-22253042,22253133-22253368,
22253457-22253559,22254692-22254824,22254930-22255039
Length = 431
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 145 YNTIPLNKHFDARIRKSTPKK*RSILYLDLYC 50
+N IPL+ F++ + +S P+ IL L +YC
Sbjct: 309 WNMIPLSVLFNSTMDESNPRDENEILLLSVYC 340
>11_03_0125 - 10346779-10347282,10347613-10347771,10348063-10348212
Length = 270
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 181 NHLXVLDKPPEYHGDRGFPFEEEEGSGAWSELAARH 288
N++ LD+P E+ D+ F ++ + G W +L RH
Sbjct: 212 NYINSLDEPHEFENDKPFIYDWKLREGPW-QLRRRH 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,342,779
Number of Sequences: 37544
Number of extensions: 440828
Number of successful extensions: 1666
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1665
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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