Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J04
         (930 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41015-4|AAA82313.1|  317|Caenorhabditis elegans Hypothetical pr...    31   0.89 
U23147-2|AAC46688.1|  918|Caenorhabditis elegans Hypothetical pr...    31   0.89 
U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical p...    30   2.1  
AL132860-24|CAB60506.1|  767|Caenorhabditis elegans Hypothetical...    30   2.1  
Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical p...    30   2.7  
Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical p...    30   2.7  
Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like ...    30   2.7  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z66494-2|CAA91257.1|  821|Caenorhabditis elegans Hypothetical pr...    29   6.3  
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>U41015-4|AAA82313.1|  317|Caenorhabditis elegans Hypothetical
           protein F20B6.5 protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
 Frame = +1

Query: 574 HEQQTQIPQYGLRNTVDLGQKS--PADPSLVDADDRTHRSMSAPPDTP-NQTKDECTQSP 744
           + ++T++P  GL  +      S   AD +  D +D     + APP TP N+ +       
Sbjct: 76  NRRRTEMPAEGLYPSQSRSNFSVRTADMAFDDGNDSQMSGVRAPPVTPRNRQRSVRPSGS 135

Query: 745 GADPSASRRDPV*CPTHTDIRRRPRQA---SHQQVSGPRH 855
            A PS   +     P + D R+RP Q+   S Q  +G  H
Sbjct: 136 NAQPSGRAQ-----PDYRDTRQRPSQSRDRSKQNRTGTPH 170


>U23147-2|AAC46688.1|  918|Caenorhabditis elegans Hypothetical
           protein C18H9.3 protein.
          Length = 918

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 27/118 (22%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
 Frame = +2

Query: 494 SRRPLRQLNHSNKRPPHRLNR--LRRTANTSSKPRYHSTDSETQ*T*GRRVPPTRAWSMR 667
           SR        S++RP    +   ++RT     + +  ST  + Q       PP   W+ R
Sbjct: 227 SRTSTNAAPQSSERPAWARSESWIQRTQQQQQQQQQQSTQQQAQ-------PPITLWNNR 279

Query: 668 TIGHTDLCQRPQTHLIK--QKMSVHNHQEQTHQPHGETQSNVRHIPIFVEGRDKPVIN 835
            +G      + + H++   +K S  NH  Q  Q   +  S     P   E     V N
Sbjct: 280 EVGSDSTVWKDRNHMVAAVRKASTENHPPQQQQQQQQRSSAPVSAPSRQESESTDVPN 337


>U32305-18|AAK18852.2|  719|Caenorhabditis elegans Hypothetical
           protein B0336.3 protein.
          Length = 719

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 631 QKSPADPSLVDADDRTHRSMSAPPDTPNQTKDECTQSPGADPSASRRD 774
           QKS + PS   A+ R  R   +PP + N+ K++ ++      S S RD
Sbjct: 115 QKSSSSPSASKAESRPLRKRISPPPSENREKEKQSRDKERRRSRSPRD 162


>AL132860-24|CAB60506.1|  767|Caenorhabditis elegans Hypothetical
           protein Y56A3A.30 protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 577 EQQTQIPQYGLRNTVDLGQKSPADPSL-VDADDRTHRSMSAPPDTPNQTKDECTQSPGAD 753
           +Q +  P   ++  V+   K   DPS+ V    ++    S  P    Q +D CT  P  D
Sbjct: 381 DQPSPDPCSDVQIGVNSTTKQSTDPSVNVQLGHKSSDQPSTDPSAHAQLEDNCTIQPSTD 440

Query: 754 PSAS 765
           PS++
Sbjct: 441 PSSN 444


>Z29094-14|CAJ43434.1|  893|Caenorhabditis elegans Hypothetical
           protein C07A9.3c protein.
          Length = 893

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 692 QRPQTHLIKQKMSVHNHQEQTHQPHGETQ 778
           Q+ Q H  +  MS HNHQ+Q  Q H   Q
Sbjct: 90  QQQQHHQQQYNMSYHNHQQQMQQMHYHQQ 118


>Z29094-10|CAD45580.2|  965|Caenorhabditis elegans Hypothetical
           protein C07A9.3b protein.
          Length = 965

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 692 QRPQTHLIKQKMSVHNHQEQTHQPHGETQ 778
           Q+ Q H  +  MS HNHQ+Q  Q H   Q
Sbjct: 157 QQQQHHQQQYNMSYHNHQQQMQQMHYHQQ 185


>Z29094-9|CAA82347.3|  960|Caenorhabditis elegans Hypothetical
           protein C07A9.3a protein.
          Length = 960

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 692 QRPQTHLIKQKMSVHNHQEQTHQPHGETQ 778
           Q+ Q H  +  MS HNHQ+Q  Q H   Q
Sbjct: 157 QQQQHHQQQYNMSYHNHQQQMQQMHYHQQ 185


>AY450852-1|AAR18092.1|  960|Caenorhabditis elegans Tousled-like
           kinase protein.
          Length = 960

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +2

Query: 692 QRPQTHLIKQKMSVHNHQEQTHQPHGETQ 778
           Q+ Q H  +  MS HNHQ+Q  Q H   Q
Sbjct: 157 QQQQHHQQQYNMSYHNHQQQMQQMHYHQQ 185


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 425 PSSESTFRRTGTAGSALATNNHNSRRPLRQLNHSNKRPPHRLNRLRRTANTSSKPRYHST 604
           P S +   R       L  +N   ++P +    S+  PP  L+   +  ++SS PR+H  
Sbjct: 729 PMSGTVADRANKFRQQLQADNEKGKKPWQHPFMSSNVPPSSLSAREQLFSSSSLPRHHRN 788

Query: 605 DS 610
            S
Sbjct: 789 SS 790


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
           protein F47A4.2 protein.
          Length = 3498

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = +1

Query: 631 QKSPADPSLVDADDRTHRSMSAPPDTPNQTKDECTQSPGADPSASRRDP 777
           +KS A PS+VD++D+  +  +A   + ++T  + T    +DP A+   P
Sbjct: 631 EKSEA-PSIVDSNDKIDKEPNASSTSNDETSKDDTVPMESDPPAATEKP 678


>Z66494-2|CAA91257.1|  821|Caenorhabditis elegans Hypothetical
           protein C34C6.2 protein.
          Length = 821

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/63 (23%), Positives = 29/63 (46%)
 Frame = +2

Query: 428 SSESTFRRTGTAGSALATNNHNSRRPLRQLNHSNKRPPHRLNRLRRTANTSSKPRYHSTD 607
           +S  T   TGT+ +   ++     + +  +N  ++ P HR   +  + N S++ RY    
Sbjct: 506 ASGKTSTATGTSSTHTISSEIRRDQRIMSVNDRSRDPSHRTVSVTDSVNISNQSRYSEQT 565

Query: 608 SET 616
           S T
Sbjct: 566 SST 568


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 586 TQIPQYGLRNTVDLGQKSPADPSLVDADDRTHRSMSAPPDT-PNQTKDECTQSPGADPS 759
           T++P  G   T     + P       A  RT  SM+ PP+T P +T+   T+ P   PS
Sbjct: 683 TEVPMTGPSRTEVPMTEPPKTEQPRTAPPRTEVSMTLPPETVPPKTEAPRTEVPMTGPS 741


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,341,366
Number of Sequences: 27780
Number of extensions: 347724
Number of successful extensions: 1140
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)